RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MGST1P10620 155 aaKnown RBP12.01□□□□□ -0.49
TCOF1-207ENST00000504761 KIR2DL2P43627 348 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-207ENST00000504761 PRRX1P54821 245 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
TCOF1-207ENST00000504761 IL24Q13007 206 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 CXorf66Q5JRM2 361 aaPredicted RBP12.01□□□□□ -0.49
TCOF1-207ENST00000504761 C17orf50Q8WW18 174 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 MALSU1Q96EH3 234 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 C19orf12Q9NSK7 152 aa12.01□□□□□ -0.49
TCOF1-207ENST00000504761 SS18L1O75177 396 aaPredicted RBP12□□□□□ -0.49
TCOF1-207ENST00000504761 CT45A6P0DMU7 189 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 CT45A5P0DMU8 189 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 CT45A7P0DMV0 189 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 OPRK1P41145 380 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 ACOT6Q3I5F7 207 aaPredicted RBP12□□□□□ -0.49
TCOF1-207ENST00000504761 CT45A1Q5HYN5 189 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 CT45A3Q8NHU0 189 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 MOB3AQ96BX8 217 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 MISP3Q96FF7 219 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 AKR1E2Q96JD6 320 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 TLN1Q9Y490 2541 aaKnown RBP12□□□□□ -0.49
TCOF1-207ENST00000504761 DTD1Q8TEA8 209 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 BIN3Q9NQY0 253 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 ZNF727A8MUV8 499 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 CDS2O95674 445 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 HARBI1Q96MB7 349 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 PCGF1Q9BSM1 259 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A10PA6NDY2 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 BTBD17A6NE02 478 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A18PA6NE21 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A16PA6NEW6 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A20PA6NIJ5 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A8PA6NJQ4 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A7PA6NKC0 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A22PA8MWA6 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A12PA8MX19 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A5PA8MXJ8 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A23PA8MXZ1 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A15PP0C7V4 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A13PP0C7W8 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A14PP0C7W9 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 FAM90A24PP0C7X0 464 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 WNT5AP41221 380 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 NTNG2Q96CW9 530 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 SOSTQ9BQB4 213 aa12□□□□□ -0.49
TCOF1-207ENST00000504761 ATRXP46100 2492 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 FREM1Q5H8C1 2179 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 FGF8P55075 233 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-207ENST00000504761 HTD2P86397 168 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 C2orf68Q2NKX9 166 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 SAXO1Q8IYX7 474 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 MUC15Q8N387 334 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 SNX22Q96L94 193 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 PNRC2Q9NPJ4 139 aaKnown RBP11.99□□□□□ -0.49
TCOF1-207ENST00000504761 INSIG2Q9Y5U4 225 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 TNXAQ16473 311 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 FFAR4Q5NUL3 377 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 ZNF818PQ6ZRF7 136 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 ANGPTL6Q8NI99 470 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 C14orf79Q96F83 325 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 SLC25A22Q9H936 323 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 ZDHHC8Q9ULC8 765 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 TDGF1P13385 188 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 GPR6P46095 362 aaPredicted RBP11.99□□□□□ -0.49
TCOF1-207ENST00000504761 DAZAP1Q96EP5 407 aaKnown RBP11.99□□□□□ -0.49
TCOF1-207ENST00000504761 MEGF10Q96KG7 1140 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 TMEM56Q96MV1 263 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 ABHD14AQ9BUJ0 271 aa11.99□□□□□ -0.49
TCOF1-207ENST00000504761 IGKV1-12A0A0C4DH73 117 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 PROB1E7EW31 1015 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 PGLYRP1O75594 196 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-207ENST00000504761 IGKV1D-12P01611 117 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 NQO2P16083 231 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 EWSR1Q01844 656 aaKnown RBP eCLIP11.98□□□□□ -0.49
TCOF1-207ENST00000504761 HSD17B10Q99714 261 aaKnown RBP11.98□□□□□ -0.49
TCOF1-207ENST00000504761 HES4Q9HCC6 221 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 TNFSF18Q9UNG2 199 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 KPTNQ9Y664 436 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 CFDP00746 253 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-207ENST00000504761 MELTFP08582 738 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 MMP7P09237 267 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-207ENST00000504761 RTN4RL2Q86UN3 420 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 COL25A1Q9BXS0 654 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-207ENST00000504761 TMEM222Q9H0R3 208 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 TNFRSF19Q9NS68 423 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 BTCP35070 178 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 OR10Z1Q8NGY1 313 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 CMTM2Q8TAZ6 248 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 TMEM171Q8WVE6 324 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 NKX6-2Q9C056 277 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-207ENST00000504761 TUBG2Q9NRH3 451 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 CALYQ9NYX4 217 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 DOK5Q9P104 306 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 CCL1P22362 96 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 RAB5CP51148 216 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 TBR1Q16650 682 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 GUK1Q16774 197 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 WDFY1Q8IWB7 410 aa11.98□□□□□ -0.49
TCOF1-207ENST00000504761 C1orf162Q8NEQ5 155 aaPredicted RBP11.98□□□□□ -0.49
TCOF1-207ENST00000504761 PRSS33Q8NF86 280 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms