RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 RPS24P62847 133 aaKnown RBP2.4□□□□□ -2.03
NEDD4-204ENST00000503468 MELKQ14680 651 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SNAI3Q3KNW1 292 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 CTXN3Q4LDR2 81 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 LDLRAD2Q5SZI1 272 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 LCN10Q6JVE6 187 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 OTOP2Q7RTS6 562 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 OR52N5Q8NH56 324 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 OR4S2Q8NH73 311 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 WFDC12Q8WWY7 111 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 ZFYVE21Q9BQ24 234 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 ATG101Q9BSB4 218 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 MS4A6AQ9H2W1 248 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 NAA60Q9H7X0 242 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 HES4Q9HCC6 221 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 BPIFA1Q9NP55 256 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 LSM5Q9Y4Y9 91 aaKnown RBP2.4□□□□□ -2.03
NEDD4-204ENST00000503468 FAM208BQ5VWN6 2430 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 BRCA2P51587 3418 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 SPTBN2O15020 2390 aa2.4□□□□□ -2.03
NEDD4-204ENST00000503468 A0A0A6YYC8 382 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 A0A1W2PNU3 283 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF878C9JN71 531 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 C9JQL5 133 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 I3L1I5 382 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ETHE1O95571 254 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 IL33O95760 270 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PRNPP04156 253 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 H2BFMP0C1H6 154 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 LINC00869P0C866 280 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 IRF1P10914 325 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 GLB1P16278 677 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 HOXB4P17483 251 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 HRH1P35367 487 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PPP1CCP36873 323 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PRRX1P54821 245 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 NHLH1Q02575 133 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 LINC01559Q495D7 138 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 LYRM7Q5U5X0 104 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 RASL11AQ6T310 242 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 THSD4Q6ZMP0 1018 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 BATF2Q8N1L9 274 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 NPEPL1Q8NDH3 523 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 MDS2Q8NDY4 140 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 RNASE8Q8TDE3 154 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TSPAN32Q96QS1 320 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TNFRSF13CQ96RJ3 184 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 C20orf24Q9BUV8 137 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 MBNL1Q9NR56 388 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF346Q9UL40 294 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 IGLV3-9A0A075B6K5 115 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TRAV9-2A0A087WT02 112 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 A0A1W2PPK0 400 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 SLC22A20A6NK97 555 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF785A8K8V0 405 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 DIRC3C9JPN6 131 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 MPPED1O15442 326 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ERI3O43414 337 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 RAD51DO75771 328 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TIAF1O95411 115 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 KLF8O95600 359 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF728P0DKX0 622 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 KITLGP21583 273 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OMGP23515 440 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF93P35789 620 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 RPS26P62854 115 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 COL10A1Q03692 680 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ODF4Q2M2E3 257 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PDZD11Q5EBL8 140 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 FAAP20Q6NZ36 180 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 TEX38Q6PEX7 206 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 SLC25A34Q6PIV7 304 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 ZNF793Q6ZN11 406 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 UEVLDQ8IX04 471 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 Q8N7P7 452 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR5D18Q8NGL1 313 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR10G9Q8NGN4 311 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 OR2Y1Q8NGV0 311 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 LSM10Q969L4 123 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 FBXO17Q96EF6 278 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 WDYHV1Q96HA8 205 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 GPR35Q9HC97 309 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 DAPP1Q9UN19 280 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 FUT9Q9Y231 359 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 LIPGQ9Y5X9 500 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 HCFC1P51610 2035 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 EPM2AB3EWF7 344 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 MPIG6BO95866 241 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CKMP06732 381 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 F3P13726 295 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 EN2P19622 333 aaPredicted RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 GALR1P47211 349 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 SNU13P55769 128 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 CTXN1P60606 82 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 BATFQ16520 125 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 MEP1BQ16820 701 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 RNF151Q2KHN1 245 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PHYHD1Q5SRE7 291 aa2.39□□□□□ -2.03
NEDD4-204ENST00000503468 MRPL2Q5T653 305 aaKnown RBP2.39□□□□□ -2.03
NEDD4-204ENST00000503468 PRAMEF20Q5VT98 475 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms