RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 HCRTR1O43613 425 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 LMX1BO60663 402 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 MT-ND4P03905 459 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 HLA-EP13747 358 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 ALOX5APP20292 161 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 CMPK1P30085 196 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 MPIP34949 423 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 PSMD8P48556 350 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 NUDT2P50583 147 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 GTF2A1P52655 376 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 CRYBA4P53673 196 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 FGF8P55075 233 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 PRDX1Q06830 199 aaKnown RBP3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 BAXQ07812 192 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 CD300CQ08708 224 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 ELOCQ15369 112 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 ACSBG2Q5FVE4 666 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 PAGE3Q5JUK9 113 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 C1orf195Q5TG92 126 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 TMEM42Q69YG0 159 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF544Q6NX49 715 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 RASSF6Q6ZTQ3 369 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 TMED4Q7Z7H5 227 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 OAFQ86UD1 273 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 MYPOPQ86VE0 399 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 NIT1Q86X76 327 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 C11orf72Q8NBR9 251 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR6T1Q8NGN1 323 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 NEIL3Q8TAT5 605 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 LCN9Q8WX39 176 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 ASB13Q8WXK3 278 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 TCEAL3Q969E4 200 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 LRRC58Q96CX6 371 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 RNF185Q96GF1 192 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 GMPPAQ96IJ6 420 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR10C1Q96KK4 312 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR52E6Q96RD3 313 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 GABARAPL3Q9BY60 117 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 C20orf27Q9GZN8 174 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 FBXL15Q9H469 300 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 C12orf10Q9HB07 376 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 CACYBPQ9HB71 228 aaKnown RBP3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 KLHL21Q9UJP4 597 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 PCTPQ9UKL6 214 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 FIS1Q9Y3D6 152 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 AP4S1Q9Y587 144 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 ORC6Q9Y5N6 252 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 SLC22A7Q9Y694 548 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 KCNE3Q9Y6H6 103 aa3.31□□□□□ -1.88
HMGB1P21-201ENST00000502313 IGLV4-3A0A075B6K6 122 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 IGHV1OR15-1A0A075B7D0 117 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 A0A0B4J2A0 478 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 IGHV3-16A0A0C4DH30 117 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 RBFOX3A6NFN3 312 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 MRASO14807 208 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 NPIPB7O75200 414 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 SERPINB7O75635 380 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 UPK1BO75841 260 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 VENTXO95231 258 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 WISP3O95389 354 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 SOX14O95416 240 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 PTHP01270 115 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 HPNP05981 417 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 CST2P09228 141 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 GKN3PP0CG01 181 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF883P0CG24 379 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 RCC1P18754 421 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 M6PRP20645 277 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 CSRP1P21291 193 aaKnown RBP3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 MYL9P24844 172 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 F2RP25116 425 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 SULT1A1P50225 295 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 SULT1A2P50226 295 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 SMIM11AP58511 58 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 PFN3P60673 137 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 NCALDP61601 193 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 ZNF630Q2M218 657 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 TTC32Q5I0X7 151 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 C9orf66Q5T8R8 295 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 NOXRED1Q6NXP6 359 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 SBSNQ6UWP8 590 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 FAM220AQ7Z4H9 259 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 GKN2Q86XP6 184 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR51D1Q8NGF3 324 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR8J3Q8NGG0 315 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 MRGPRDQ8TDS7 321 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 GEMIN6Q8WXD5 167 aaKnown RBP3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 ASB17Q8WXJ9 295 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 RGP1Q92546 391 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 COX14Q96I36 57 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 C18orf12Q96KH6 178 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 DUX3Q96PT4 197 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 OR52B2Q96RD2 323 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 EBF4Q9BQW3 602 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 FAAP24Q9BTP7 215 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 MED18Q9BUE0 208 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 EMC6Q9BV81 110 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 OCR1Q9BZK8 76 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 SRMSQ9H3Y6 488 aa3.3□□□□□ -1.88
HMGB1P21-201ENST00000502313 EDA2RQ9HAV5 297 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms