RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 C5orf24Q7Z6I8 188 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 LINC00596Q86U02 117 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 SPATA24Q86W54 205 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 STX19Q8N4C7 294 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 DEFB125Q8N687 156 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 OR8J1Q8NGP2 316 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 RFKQ969G6 155 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 METTL9Q9H1A3 318 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 RAB9BQ9NP90 201 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 OR2S2Q9NQN1 319 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 ETAA1Q9NY74 926 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 SIGLEC8Q9NYZ4 499 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 ING4Q9UNL4 249 aa11.81□□□□□ -0.52
HDAC6-236ENST00000498808 TCRBV3S1A0A5B6 114 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 MAGEB3O15480 346 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 DEDDO75618 318 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 TPPPO94811 219 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 TFAP2AP05549 437 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 CD7P09564 240 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 CD40LGP29965 261 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 PPP1CCP36873 323 aaKnown RBP11.8□□□□□ -0.52
HDAC6-236ENST00000498808 PLGLAQ15195 96 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 FAM131AQ6UXB0 335 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 GAPTQ8N292 157 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 OR52L2PQ8NGH6 319 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 GATAD1Q8WUU5 269 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 TSEN15Q8WW01 171 aaKnown RBP11.8□□□□□ -0.52
HDAC6-236ENST00000498808 CYYR1Q96J86 154 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 PDCD1LG2Q9BQ51 273 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 NEURL2Q9BR09 285 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 RIBC2Q9H4K1 309 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 TAS2R4Q9NYW5 299 aa11.8□□□□□ -0.52
HDAC6-236ENST00000498808 RCC2Q9P258 522 aaKnown RBP11.8□□□□□ -0.52
HDAC6-236ENST00000498808 SAA2-SAA4A0A096LPE2 208 aa11.79□□□□□ -0.52
HDAC6-236ENST00000498808 CXorf65A6NEN9 183 aa11.79□□□□□ -0.52
HDAC6-236ENST00000498808 CNIH1O95406 144 aa11.79□□□□□ -0.52
HDAC6-236ENST00000498808 SAA2P0DJI9 122 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-236ENST00000498808 T-ENOLP0DO92 83 aa11.79□□□□□ -0.52
HDAC6-236ENST00000498808 RGP1Q92546 391 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-236ENST00000498808 CLCC1Q96S66 551 aa11.79□□□□□ -0.52
HDAC6-236ENST00000498808 THTPAQ9BU02 230 aa11.79□□□□□ -0.52
HDAC6-236ENST00000498808 SRD5A3Q9H8P0 318 aa11.79□□□□□ -0.52
HDAC6-236ENST00000498808 TAF9BQ9HBM6 251 aa11.79□□□□□ -0.52
HDAC6-236ENST00000498808 C13orf42A0A1B0GVH6 325 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 NUPR2A6NF83 97 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 TMEM212A6NML5 194 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 E9PI62 339 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 TRBV12-3P01733 135 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 ALDH3A2P51648 485 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 DYRK1AQ13627 763 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 FLOT2Q14254 428 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 MOGAT2Q3SYC2 334 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 TRAT1Q6PIZ9 186 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 POC5Q8NA72 575 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 MRPS24Q96EL2 167 aaKnown RBP11.78□□□□□ -0.52
HDAC6-236ENST00000498808 CIB1Q99828 191 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 JPT1Q9UK76 154 aa11.78□□□□□ -0.52
HDAC6-236ENST00000498808 VPS13DQ5THJ4 4388 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 ZNF785A8K8V0 405 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 MCRIP1C9JLW8 97 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 G3V2T6 193 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 FADS2O95864 444 aaKnown RBP11.77□□□□□ -0.53
HDAC6-236ENST00000498808 CA2P00918 260 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 CALB2P22676 271 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 SOX2P48431 317 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 DEFA5Q01523 94 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 EWSR1Q01844 656 aaKnown RBP eCLIP11.77□□□□□ -0.53
HDAC6-236ENST00000498808 ZNF562Q6V9R5 426 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 GLDNQ6ZMI3 551 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-236ENST00000498808 ACBD7Q8N6N7 88 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 OR2K2Q8NGT1 345 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 OR5AK2Q8NH90 309 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 JAM3Q9BX67 310 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 GABARAPL1Q9H0R8 117 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 IFI27L2Q9H2X8 130 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 ISG20L2Q9H9L3 353 aaKnown RBP11.77□□□□□ -0.53
HDAC6-236ENST00000498808 MED4Q9NPJ6 270 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 ZNF355PQ9NSJ1 428 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 MBNL3Q9NUK0 354 aaKnown RBP11.77□□□□□ -0.53
HDAC6-236ENST00000498808 SLC23A1Q9UHI7 598 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 ENOPH1Q9UHY7 261 aa11.77□□□□□ -0.53
HDAC6-236ENST00000498808 A0A0G2JLM5 398 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 YPEL1O60688 119 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 CT45A6P0DMU7 189 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 CT45A5P0DMU8 189 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 CT45A7P0DMV0 189 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 GTF2F2P13984 249 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 ZNF93P35789 620 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-236ENST00000498808 CD300EQ496F6 205 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-236ENST00000498808 SLC22A6Q4U2R8 563 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 DDI2Q5TDH0 399 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 CEMP1Q6PRD7 247 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-236ENST00000498808 LAX1Q8IWV1 398 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 YPEL2Q96QA6 119 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 OVOL2Q9BRP0 275 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 SPACA1Q9HBV2 294 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 PAK1IP1Q9NWT1 392 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-236ENST00000498808 SLC2A8Q9NY64 477 aa11.76□□□□□ -0.53
HDAC6-236ENST00000498808 METTL1Q9UBP6 276 aaKnown RBP11.76□□□□□ -0.53
HDAC6-236ENST00000498808 OR11H12B2RN74 326 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms