RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 FFAR4Q5NUL3 377 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 PHYHD1Q5SRE7 291 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 MBNL2Q5VZF2 373 aaKnown RBP4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 WDR74Q6RFH5 385 aaPredicted RBP4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 Q6ZN92 141 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 ODF3L1Q8IXM7 274 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 H1FOOQ8IZA3 346 aaPredicted RBP4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 FAM89BQ8N5H3 189 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 ZNF676Q8N7Q3 588 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 OR6N2Q8NGY6 317 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 OR13G1Q8NGZ3 307 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 SNIP1Q8TAD8 396 aaKnown RBP4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 PTPMT1Q8WUK0 201 aaPredicted RBP4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 VSTM2LQ96N03 204 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 UHRF2Q96PU4 802 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 LMF2Q9BU23 707 aaKnown RBP4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 DUSP23Q9BVJ7 150 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 TMEM106BQ9NUM4 274 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 GNG13Q9P2W3 67 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 GPR132Q9UNW8 380 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 PKD1L2Q7Z442 2459 aa4.97□□□□□ -1.61
SOX2-OT-218ENST00000498731 TRAV26-1A0A087WT03 109 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 NPIPB13A6NJU9 1138 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 NPIPB4C9JG80 1138 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 TAAR5O14804 337 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 AGFG2O95081 481 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 ALOX5APP20292 161 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 GATA3P23771 443 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 OTX2P32243 289 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 PPOXP50336 477 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 LHX2P50458 406 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 VAMP3Q15836 100 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 ACTL10Q5JWF8 245 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 PRR31Q5SQ13 230 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 FHL5Q5TD97 284 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 OR51G1Q8NGK1 321 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 TMEM170AQ8WVE7 144 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 PILRBQ9UKJ0 227 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 B9D1Q9UPM9 204 aa4.96□□□□□ -1.61
SOX2-OT-218ENST00000498731 GP1BBP13224 206 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 SLC6A6P31641 620 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 MPLP40238 635 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 RPL23AP62750 156 aaKnown RBP4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 ADIRFQ15847 76 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 TMEM128Q5BJH2 165 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 AMMECR1LQ6DCA0 310 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 DPY19L4Q7Z388 723 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 STPG3Q8N7X2 389 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 OR2G3Q8NGZ4 309 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 GATAD1Q8WUU5 269 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 SPSB4Q96A44 273 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 GPHA2Q96T91 129 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 ATP5SQ99766 215 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 DEFB126Q9BYW3 111 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 LIME1Q9H400 295 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 MANBALQ9NQG1 85 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 AK3Q9UIJ7 227 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 FAM24AA6NFZ4 105 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 SLC17A2O00624 439 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 HMGB3O15347 200 aaKnown RBP4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 SFTPDP35247 375 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF92Q03936 586 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 SPATA45Q537H7 98 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 KHDC1LQ5JSQ8 128 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 PLAC9Q5JTB6 97 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 PMS2CLQ68D20 193 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 HIST2H2BCQ6DN03 193 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 HIST2H2BDQ6DRA6 164 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 EIF5AL1Q6IS14 154 aaKnown RBP4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 LCN12Q6JVE5 192 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 TMEM234Q8WY98 164 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 NAA38Q9BRA0 125 aaKnown RBP4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 AGMATQ9BSE5 352 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 VAMP8Q9BV40 100 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 CDIP1Q9H305 208 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 SDF2L1Q9HCN8 221 aa4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 DNAJB12Q9NXW2 375 aaKnown RBP4.96□□□□□ -1.62
SOX2-OT-218ENST00000498731 IGHV5-10-1A0A0J9YXX1 117 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 LRRC3CA6NJW4 275 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 HS3ST1O14792 307 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 WISP1O95388 367 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 CDS2O95674 445 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 GAPDHP04406 335 aaKnown RBP4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 SEC11BP0C7V7 166 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 IGLC2P0DOY2 106 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 IGLC3P0DOY3 106 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 BMP5P22003 454 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF93P35789 620 aaPredicted RBP4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 P2RY1P47900 373 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 RPS4XP62701 263 aaKnown RBP4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 SNAI3Q3KNW1 292 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZDHHC22Q8N966 263 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 Q8NA96 180 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 SUMF1Q8NBK3 374 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 OCC1Q8TAD7 63 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 CLDN23Q96B33 292 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF524Q96C55 264 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 ZNF501Q96CX3 271 aaPredicted RBP4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 BTF3L4Q96K17 158 aa4.95□□□□□ -1.62
SOX2-OT-218ENST00000498731 FAM71F1Q96KD3 344 aaPredicted RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms