RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 HSPB1P04792 205 aaKnown RBP11.27□□□□□ -0.61
TRAF4-212ENST00000498540 EGR2P11161 476 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-212ENST00000498540 BDKRB2P30411 391 aa11.27□□□□□ -0.61
TRAF4-212ENST00000498540 ZNF833PQ6ZTB9 187 aa11.27□□□□□ -0.61
TRAF4-212ENST00000498540 ZNF184Q99676 751 aaPredicted RBP11.27□□□□□ -0.61
TRAF4-212ENST00000498540 RSRP1Q9BUV0 290 aa11.27□□□□□ -0.61
TRAF4-212ENST00000498540 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
TRAF4-212ENST00000498540 SPACA1Q9HBV2 294 aa11.27□□□□□ -0.61
TRAF4-212ENST00000498540 KIAA1456Q9P272 454 aa11.27□□□□□ -0.61
TRAF4-212ENST00000498540 STUB1Q9UNE7 303 aa11.27□□□□□ -0.61
TRAF4-212ENST00000498540 SAA2-SAA4A0A096LPE2 208 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 EI24O14681 340 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 LIMS3P0CW19 117 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 LIMS4P0CW20 117 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 SAA2P0DJI9 122 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-212ENST00000498540 ARSBP15848 533 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 CX3CL1P78423 397 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 HAGHQ16775 308 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 C1orf146Q5VVC0 180 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 ZNF660Q6AZW8 331 aaPredicted RBP11.26□□□□□ -0.61
TRAF4-212ENST00000498540 TRAT1Q6PIZ9 186 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 FAM131AQ6UXB0 335 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 OR52I1Q8NGK6 324 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 OR13C5Q8NGS8 318 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 ABHD5Q8WTS1 349 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 FLYWCH2Q96CP2 140 aaKnown RBP11.26□□□□□ -0.61
TRAF4-212ENST00000498540 MS4A10Q96PG2 267 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 FAM103A1Q9BTL3 118 aaKnown RBP11.26□□□□□ -0.61
TRAF4-212ENST00000498540 KRTAP17-1Q9BYP8 105 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 GAB2Q9UQC2 676 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 ERGIC3Q9Y282 383 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 ORC6Q9Y5N6 252 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 NUBP2Q9Y5Y2 271 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 PEX16Q9Y5Y5 336 aa11.26□□□□□ -0.61
TRAF4-212ENST00000498540 FCN1O00602 326 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 SC5DO75845 299 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 JTBO76095 146 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 IGFBP3P17936 291 aaPredicted RBP11.25□□□□□ -0.61
TRAF4-212ENST00000498540 TPPP2P59282 170 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 RAB40BQ12829 278 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 RIPK1Q13546 671 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 ANKRD13BQ86YJ7 626 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 TCTEX1D1Q8N7M0 179 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 MUL1Q969V5 352 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 ELOVL1Q9BW60 279 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 MBNL3Q9NUK0 354 aaKnown RBP11.25□□□□□ -0.61
TRAF4-212ENST00000498540 JPT1Q9UK76 154 aa11.25□□□□□ -0.61
TRAF4-212ENST00000498540 UBE2QL1A1L167 161 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 RRHO14718 337 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
TRAF4-212ENST00000498540 GPR176Q14439 515 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 ACTBL2Q562R1 376 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 SIGIRRQ6IA17 410 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 PYHIN1Q6K0P9 492 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 RPL22L1Q6P5R6 122 aaKnown RBP11.24□□□□□ -0.61
TRAF4-212ENST00000498540 CD200R1LQ6Q8B3 271 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 UNQ5815/PRO19632Q6UWF5 114 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 GLIPR1L1Q6UWM5 242 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 MRPL30Q8TCC3 161 aaKnown RBP11.24□□□□□ -0.61
TRAF4-212ENST00000498540 MRPS24Q96EL2 167 aaKnown RBP11.24□□□□□ -0.61
TRAF4-212ENST00000498540 RHOVQ96L33 236 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 IFI27L2Q9H2X8 130 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 BANF2Q9H503 90 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 RETNQ9HD89 108 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 GMPPBQ9Y5P6 360 aa11.24□□□□□ -0.61
TRAF4-212ENST00000498540 TRAV8-7A0A075B6U6 113 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 YPEL1O60688 119 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 CA11O75493 328 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 MAS1P04201 325 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 HTD2P86397 168 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 PLGLAQ15195 96 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 CCDC58Q4VC31 144 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 OR2G6Q5TZ20 316 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 PPP1R27Q86WC6 154 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 RHOXF1Q8NHV9 184 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 YPEL2Q96QA6 119 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 SELENOIQ9C0D9 397 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 KCNIP1Q9NZI2 227 aa11.23□□□□□ -0.61
TRAF4-212ENST00000498540 CNOT2Q9NZN8 540 aaKnown RBP11.23□□□□□ -0.61
TRAF4-212ENST00000498540 ST8SIA5O15466 376 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 IFNA6P05013 189 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 MGMTP16455 207 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 ETV1P50549 477 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 ALDH3A2P51648 485 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 TMEM267Q0VDI3 215 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-212ENST00000498540 RPL39P5Q59GN2 51 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 GLDNQ6ZMI3 551 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-212ENST00000498540 ZNF554Q86TJ5 538 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 JAGN1Q8N5M9 183 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 LFNGQ8NES3 379 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 OR2AK2Q8NG84 335 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 PYDC1Q8WXC3 89 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 Q96M66 194 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 Q96MT0 163 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 RDH12Q96NR8 316 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 CLCC1Q96S66 551 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 THAP7Q9BT49 309 aaPredicted RBP11.22□□□□□ -0.61
TRAF4-212ENST00000498540 MRPS18AQ9NVS2 196 aaKnown RBP11.22□□□□□ -0.61
TRAF4-212ENST00000498540 RNF150Q9ULK6 438 aa11.22□□□□□ -0.61
TRAF4-212ENST00000498540 ALMS1Q8TCU4 4167 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms