RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 PHF1O43189 567 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 DIRAS3O95661 229 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 OR2H2O95918 312 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 HAND1O96004 215 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 NAPSAO96009 420 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 CD55P08174 381 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 OR4E1P0C645 316 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 OR5H8P0DN80 308 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 ANXA7P20073 488 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 DNASE1P24855 282 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 SERPINF1P36955 418 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 RBMXP38159 391 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 GMFBP60983 142 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 SRSF4Q08170 494 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 SURF2Q15527 256 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 MPPED2Q15777 294 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 ADIPOQQ15848 244 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 KRTAP24-1Q3LI83 254 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 TOR2AQ5JU69 321 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 ATPAF1Q5TC12 328 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF626Q68DY1 528 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 LAMTOR1Q6IAA8 161 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 LPCAT3Q6P1A2 487 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 Q6P435 159 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 TEX261Q6UWH6 196 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 DHRS11Q6UWP2 260 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF826PQ6ZT77 177 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 MOB1BQ7L9L4 216 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 SLC36A1Q7Z2H8 476 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 TMED4Q7Z7H5 227 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 PEG10Q86TG7 708 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 RTN4RL2Q86UN3 420 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 SLC25A42Q86VD7 318 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 MOGAT3Q86VF5 341 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 C1orf87Q8N0U7 546 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 SPICQ8N5J4 248 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 OR8H1Q8NGG4 311 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 OR13C8Q8NGS7 320 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 LHFPL5Q8TAF8 219 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 LINC01560Q8TB33 94 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF431Q8TF32 576 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 ITLN1Q8WWA0 313 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 MAFIPQ8WZ33 124 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 RDH5Q92781 318 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF2Q9BSG1 426 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 HDHD3Q9BSH5 251 aaPredicted RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 Q9N2K0 584 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 DECR2Q9NUI1 292 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 MED9Q9NWA0 146 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 CISD1Q9NZ45 108 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 KCNIP1Q9NZI2 227 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 DNAJB11Q9UBS4 358 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF69Q9UC07 566 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 OR14J1Q9UGF5 321 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 KIF25Q9UIL4 384 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 GPR132Q9UNW8 380 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 C14orf166Q9Y224 244 aaKnown RBP4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 RNF115Q9Y4L5 304 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 WIPI2Q9Y4P8 454 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 NPTNQ9Y639 398 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 U3KQ87 197 aa4.42□□□□□ -1.7
HMGXB4-208ENST00000498325 IGHV3-64DA0A0J9YX35 117 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 TMEM30CPA0ZSE6 113 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 RFPL4AA6NLU0 287 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 CEACAM18A8MTB9 384 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SHISA9B4DS77 424 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 E7EQL1 145 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 RFPL4AL1F8VTS6 287 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SLC33A1O00400 549 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 WNT9BO14905 357 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 FABP7O15540 132 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 TSPAN9O75954 239 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 LHBP01229 141 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 IGHV1-46P01743 117 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 TK1P04183 234 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 CTSDP07339 412 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF728P0DKX0 622 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SULT1A3P0DMM9 295 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SULT1A4P0DMN0 295 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 PSG2P11465 335 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 PGAM2P15259 253 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 AKR1C4P17516 323 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 PRDX2P32119 198 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 NPY4RP50391 375 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 UCP3P55916 312 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 HERV-K104P61576 105 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SEC61A1P61619 476 aaKnown RBP4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 FCN2Q15485 313 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 EFNB3Q15768 340 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 DEFB113Q30KQ7 82 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 PDLIM3Q53GG5 364 aaPredicted RBP4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 TMEM128Q5BJH2 165 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 SLC35E4Q6ICL7 350 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 LIN54Q6MZP7 749 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 ADAM5Q6NVV9 412 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF880Q6PDB4 577 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 TRAT1Q6PIZ9 186 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 ZNF497Q6ZNH5 498 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 LYG2Q86SG7 212 aa4.41□□□□□ -1.7
HMGXB4-208ENST00000498325 LHFPL1Q86WI0 220 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms