RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 TMEM59Q9BXS4 323 aa14.63□□□□□ -0.07
PRKCB-209ENST00000498058 IGKV1D-33P01593 117 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 IGKV1-33P01594 117 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 VSIG8P0DPA2 414 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 MGMTP16455 207 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 TMEM11P17152 192 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 RAB6AP20340 208 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 PAX5Q02548 391 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 HES1Q14469 280 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 NHLRC3Q5JS37 347 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 RAB22AQ9UL26 194 aa14.62□□□□□ -0.07
PRKCB-209ENST00000498058 AMMECR1Q9Y4X0 333 aaPredicted RBP14.62□□□□□ -0.07
PRKCB-209ENST00000498058 METTL21EPA6NDL7 271 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 TMEM14DPA8MWL7 114 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 DUS4LO95620 317 aaKnown RBP14.61□□□□□ -0.07
PRKCB-209ENST00000498058 MADCAM1Q13477 382 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 SUMF2Q8NBJ7 301 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 UBALD1Q8TB05 177 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 LGALS14Q8TCE9 139 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 DUX3Q96PT4 197 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 DCUN1D5Q9BTE7 237 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 BARHL1Q9BZE3 327 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 SELENOIQ9C0D9 397 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 SPATA2Q9UM82 520 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 ST3GAL6Q9Y274 331 aa14.61□□□□□ -0.07
PRKCB-209ENST00000498058 IGHV3-72A0A0B4J1Y9 119 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 TMEM272A0A1B0GTI8 110 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 FAM90A10PA6NDY2 464 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 FAM90A7PA6NKC0 464 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 FAM90A23PA8MXZ1 464 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 C15orf65H3BRN8 121 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 FGF16O43320 207 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 SCGNO76038 276 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 IGHG2P01859 326 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 SNRPBP14678 240 aaKnown RBP14.6□□□□□ -0.07
PRKCB-209ENST00000498058 REG1BP48304 166 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 RBM11P57052 281 aaKnown RBP14.6□□□□□ -0.07
PRKCB-209ENST00000498058 RPS27AP62979 156 aaKnown RBP14.6□□□□□ -0.07
PRKCB-209ENST00000498058 QRFPP83859 136 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 EBI3Q14213 229 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 OR8H3Q8N146 312 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 FAM46BQ96A09 425 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 CYYR1Q96J86 154 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 P2RX4Q99571 388 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 DPCDQ9BVM2 203 aaPredicted RBP14.6□□□□□ -0.07
PRKCB-209ENST00000498058 BANF2Q9H503 90 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 RYR3Q15413 4870 aa14.6□□□□□ -0.07
PRKCB-209ENST00000498058 A0A0B4J203 849 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 A0A1W2PP11 408 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 SERPINE3A8MV23 424 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 LDLRAD4O15165 306 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 RAB7AP51149 207 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 MPV17LQ2QL34 196 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 Q8N6K4 173 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 TMEM104Q8NE00 496 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 OR10A7Q8NGE5 316 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 CHPT1Q8WUD6 406 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 Q96M66 194 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 CMTM3Q96MX0 182 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 SPACA1Q9HBV2 294 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 A3GALT2U3KPV4 340 aa14.59□□□□□ -0.07
PRKCB-209ENST00000498058 A0A075B6Q4 140 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 IGHV1-3A0A0C4DH29 117 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 HSD17B6O14756 317 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 GEMIN2O14893 280 aaKnown RBP14.58□□□□□ -0.08
PRKCB-209ENST00000498058 KCNJ3P48549 501 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 ZNF816Q0VGE8 651 aaPredicted RBP14.58□□□□□ -0.08
PRKCB-209ENST00000498058 UNC119Q13432 240 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 UBE2NLQ5JXB2 153 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 OR10K2Q6IF99 312 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 LCNL1Q6ZST4 164 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 SLC35E3Q7Z769 313 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 STPG2Q8N412 459 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 SAMD12Q8N8I0 201 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 KLHL30-AS1Q8NEE0 82 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 OR56B1Q8NGI3 324 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 MCFD2Q8NI22 146 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 EAF1Q96JC9 268 aaPredicted RBP14.58□□□□□ -0.08
PRKCB-209ENST00000498058 TM2D1Q9BX74 207 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 KCNK15Q9H427 330 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 IFT22Q9H7X7 185 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 RHBDL2Q9NX52 303 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 COMMD3Q9UBI1 195 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 ADAM30Q9UKF2 790 aa14.58□□□□□ -0.08
PRKCB-209ENST00000498058 IGHV3-43A0A0B4J1X8 118 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 ZNF736B4DX44 427 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-209ENST00000498058 OR7C1O76099 320 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-209ENST00000498058 IGHV3-43DP0DP04 118 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 MYCNOSP40205 109 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 RAB12Q6IQ22 244 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 MOB3BQ86TA1 216 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 Q8N9W7 124 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 OR10X1Q8NGY0 326 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 CCDC107Q8WV48 283 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 ST6GALNAC6Q969X2 333 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 SLIRPQ9GZT3 109 aaKnown RBP14.57□□□□□ -0.08
PRKCB-209ENST00000498058 C6orf62Q9GZU0 229 aaPredicted RBP14.57□□□□□ -0.08
PRKCB-209ENST00000498058 ATG5Q9H1Y0 275 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 PLSCR3Q9NRY6 295 aa14.57□□□□□ -0.08
PRKCB-209ENST00000498058 ZFP57Q9NU63 452 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms