RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 RPS4XP62701 263 aaKnown RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 RANP62826 216 aaKnown RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 ARF1P84077 181 aaKnown RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 TGFBR3Q03167 851 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 UBE2V2Q15819 145 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 HIST3H3Q16695 136 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 FAM27D1Q5T7N8 215 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 CARD17Q5XLA6 110 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 GGNBP1Q5YKI7 109 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 C11orf71Q6IPW1 123 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 FAHD2BQ6P2I3 314 aaPredicted RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 RPL22L1Q6P5R6 122 aaKnown RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 Q6ZRG5 221 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 DNM1P46Q6ZS02 220 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 SSX8Q7RTT4 187 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 SLC16A14Q7RTX9 510 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 ABHD12BQ7Z5M8 362 aaPredicted RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 MEX3DQ86XN8 651 aaKnown RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 ZNF573Q86YE8 665 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 TGIF2LYQ8IUE0 185 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 FOXRED2Q8IWF2 684 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 NRMQ8IXM6 262 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 C20orf196Q8IYI0 205 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 LRRC75A-AS1Q8N1F1 130 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 C10orf53Q8N6V4 93 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 ZDHHC22Q8N966 263 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 LRRC75AQ8NAA5 344 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 SUMF2Q8NBJ7 301 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 OR13C8Q8NGS7 320 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 CD300LFQ8TDQ1 290 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 MRGPRDQ8TDS7 321 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 TMEM54Q969K7 222 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 PIGTQ969N2 578 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 ISOC2Q96AB3 205 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 RAB39BQ96DA2 213 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 FAHD2AQ96GK7 314 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 PGLYRP3Q96LB9 341 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 TBX5Q99593 518 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 PRRT1Q99946 306 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 ZNF649Q9BS31 505 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 PLA2G12AQ9BZM1 189 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 COMMD4Q9H0A8 199 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 WDR13Q9H1Z4 485 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 ISG20L2Q9H9L3 353 aaKnown RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 NGBQ9NPG2 151 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 HEYLQ9NQ87 328 aaPredicted RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 HINT3Q9NQE9 182 aaKnown RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 ZNF701Q9NV72 531 aaPredicted RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 BEX4Q9NWD9 120 aaPredicted RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 OR14J1Q9UGF5 321 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 OR52A1Q9UKL2 312 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 MED31Q9Y3C7 131 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 AK6Q9Y3D8 172 aaKnown RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 STRAPQ9Y3F4 350 aaKnown RBP4.15□□□□□ -1.74
CSMD3-208ENST00000497026 V9GY05 133 aa4.15□□□□□ -1.74
CSMD3-208ENST00000497026 LRBAP50851 2863 aa4.15□□□□□ -1.75
CSMD3-208ENST00000497026 CR1P17927 2039 aa4.15□□□□□ -1.75
CSMD3-208ENST00000497026 VPS13CQ709C8 3753 aa4.15□□□□□ -1.75
CSMD3-208ENST00000497026 TRAV27A0A087WT01 109 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 TRBV6-7A0A0A0MS04 114 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 C5orf51A6NDU8 294 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 IFITM10A6NMD0 228 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 FAM157AC9JC47 383 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 E7EQL1 145 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 M0R1B8 84 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 NDUFS7O75251 213 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 CYB5AP00167 134 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 QDPRP09417 244 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 CECR9P0C854 216 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 B4GALT1P15291 398 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 IL2RGP31785 369 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 PRSS3P35030 304 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 ACVR1BP36896 505 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 CDKN1AP38936 164 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 GPR4P46093 362 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 ZNF133P52736 654 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 FXYD6P3P58550 94 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 RPS23P62266 143 aaKnown RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 MRPS11P82912 194 aaKnown RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 DHRS2Q13268 280 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 GUK1Q16774 197 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 Q5PR19 223 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 CLEC12AQ5QGZ9 265 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 LEMD1Q68G75 181 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 OR2T2Q6IF00 324 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 ETFRF1Q6IPR1 90 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 PLBD1Q6P4A8 553 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 PRSS54Q6PEW0 395 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 KLHL24Q6TFL4 600 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 BTNL8Q6UX41 500 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 FAM220AQ7Z4H9 259 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 CPOQ8IVL8 374 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 TMEM183AQ8IXX5 376 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 CIARTQ8N365 385 aaPredicted RBP4.14□□□□□ -1.75
CSMD3-208ENST00000497026 JAGN1Q8N5M9 183 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 NOXO1Q8NFA2 376 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 OR5AK2Q8NH90 309 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 FGFBP3Q8TAT2 258 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 SECTM1Q8WVN6 248 aa4.14□□□□□ -1.75
CSMD3-208ENST00000497026 GHSRQ92847 366 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms