RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 MRGPRDQ8TDS7 321 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 NINJ1Q92982 152 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 RAB40CQ96S21 281 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 SFXN3Q9BWM7 321 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 OR2D2Q9H210 308 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 METRNQ9UJH8 293 aa10.95□□□□□ -0.66
GARNL3-220ENST00000496711 KIAA1324LA8MWY0 1029 aaPredicted RBP10.94□□□□□ -0.66
GARNL3-220ENST00000496711 K7N7A8 449 aa10.94□□□□□ -0.66
GARNL3-220ENST00000496711 CRYAAP02489 173 aa10.94□□□□□ -0.66
GARNL3-220ENST00000496711 ATP6V0CP27449 155 aa10.94□□□□□ -0.66
GARNL3-220ENST00000496711 SNCAP37840 140 aa10.94□□□□□ -0.66
GARNL3-220ENST00000496711 MSMPQ1L6U9 139 aa10.94□□□□□ -0.66
GARNL3-220ENST00000496711 ALKBH2Q6NS38 261 aa10.94□□□□□ -0.66
GARNL3-220ENST00000496711 OR52L2PQ8NGH6 319 aa10.94□□□□□ -0.66
GARNL3-220ENST00000496711 OR10Z1Q8NGY1 313 aa10.94□□□□□ -0.66
GARNL3-220ENST00000496711 SRRM5B3KS81 715 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 FAM157AC9JC47 383 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 C1QL1O75973 258 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 IGHV3-13P01766 116 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 FHITP49789 147 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 PAX5Q02548 391 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 MSMO1Q15800 293 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 IZUMO4Q1ZYL8 232 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 KRTCAP3Q53RY4 240 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 TRAT1Q6PIZ9 186 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 FAM180AQ6UWF9 173 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 Q6ZRM9 215 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 LRP11Q86VZ4 500 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 ZNF295-AS1Q8N0V1 137 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 CD177Q8N6Q3 437 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 TMEM217Q8N7C4 229 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 OR2G3Q8NGZ4 309 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 FAM57AQ8TBR7 257 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 MUCL1Q96DR8 90 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 LURAP1Q96LR2 239 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 ATP5SQ99766 215 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 DUSP13Q9UII6 198 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 WSB1Q9Y6I7 421 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 UMAD1C9J7I0 102 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 TXNL1O43396 289 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 SYNGR2O43760 224 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 EGR1P18146 543 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 CEACAM8P31997 349 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-220ENST00000496711 GLRXP35754 106 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 GLIPR1P48060 266 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 SULT1A1P50225 295 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 KLF3P57682 345 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-220ENST00000496711 CATR1Q13166 79 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 FAM90A1Q86YD7 464 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 OR13A1Q8NGR1 328 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 FAM213BQ8TBF2 198 aa10.93□□□□□ -0.66
GARNL3-220ENST00000496711 GNPNAT1Q96EK6 184 aaPredicted RBP10.93□□□□□ -0.66
GARNL3-220ENST00000496711 ESRP2Q9H6T0 727 aaKnown RBP10.93□□□□□ -0.66
GARNL3-220ENST00000496711 RIF1Q5UIP0 2472 aaKnown RBP10.92□□□□□ -0.66
GARNL3-220ENST00000496711 H3BP45 60 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 MKRN2OSH3BPM6 223 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 DFFBO76075 338 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 F12P00748 615 aaPredicted RBP10.92□□□□□ -0.66
GARNL3-220ENST00000496711 SSTR5P35346 364 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 PPP1CCP36873 323 aaKnown RBP10.92□□□□□ -0.66
GARNL3-220ENST00000496711 NKX6-1P78426 367 aaPredicted RBP10.92□□□□□ -0.66
GARNL3-220ENST00000496711 EIF4EBP1Q13541 118 aaPredicted RBP10.92□□□□□ -0.66
GARNL3-220ENST00000496711 GUK1Q16774 197 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 TPRX1Q8N7U7 411 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 CLRN3Q8NCR9 226 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 LFNGQ8NES3 379 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 C5orf30Q96GV9 206 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 KPTNQ9Y664 436 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 FRYQ5TBA9 3013 aa10.92□□□□□ -0.66
GARNL3-220ENST00000496711 C9JQL5 133 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 PRDX2P32119 198 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 NPBWR1P48145 328 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 RPS23P62266 143 aaKnown RBP10.91□□□□□ -0.66
GARNL3-220ENST00000496711 TMEM267Q0VDI3 215 aaPredicted RBP10.91□□□□□ -0.66
GARNL3-220ENST00000496711 PEA15Q15121 130 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 ZNF808Q8N4W9 903 aaPredicted RBP10.91□□□□□ -0.66
GARNL3-220ENST00000496711 OR2V2Q96R30 315 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 COA4Q9NYJ1 87 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 RNF150Q9ULK6 438 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 MMP24Q9Y5R2 645 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 SPENQ96T58 3664 aaKnown RBP10.91□□□□□ -0.66
GARNL3-220ENST00000496711 TANC2Q9HCD6 1990 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 MUC6Q6W4X9 2439 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 ASPMQ8IZT6 3477 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 IGKV1D-17A0A075B6S4 117 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 FAM90A26D6RGX4 464 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 SPINT2O43291 252 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 ZNF737O75373 536 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 CFHR2P36980 270 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 PPT1P50897 306 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 DHRS7BQ6IAN0 325 aaPredicted RBP10.91□□□□□ -0.66
GARNL3-220ENST00000496711 FAM53AQ6NSI3 398 aaPredicted RBP10.91□□□□□ -0.66
GARNL3-220ENST00000496711 GCSAMQ8N6F7 178 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 MEGF10Q96KG7 1140 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 PBDC1Q9BVG4 233 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 SCRT1Q9BWW7 348 aa10.91□□□□□ -0.66
GARNL3-220ENST00000496711 SEBOXQ9HB31 216 aaPredicted RBP10.91□□□□□ -0.66
GARNL3-220ENST00000496711 RAI1Q7Z5J4 1906 aaPredicted RBP10.9□□□□□ -0.66
GARNL3-220ENST00000496711 CEP250Q9BV73 2442 aa10.9□□□□□ -0.66
GARNL3-220ENST00000496711 IGLV3-9A0A075B6K5 115 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms