RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-208	ENST00000496081	LTC4S	Q16873	150 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	LYPD2	Q6UXB3	125 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	MEX3B	Q6ZN04	569 aa	Known RBP	13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	TCF23	Q7RTU1	214 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	DRAM1	Q8N682	238 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	TMEM56	Q96MV1	263 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	RNF150	Q9ULK6	438 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	TMEM56-RWDD3	S4R434	201 aa		13.58	□□□□□ -0.24
HLA-A-208	ENST00000496081	TRGV10	A0A0A0MS01	117 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	LYNX1	G3V0Z9	82 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081		H0Y980	276 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	F2RL2	O00254	374 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	FCN3	O75636	299 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	DANCR	P0C864	163 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	LYNX1	P0DP58	116 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	COL8A2	P25067	703 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	UCP1	P25874	307 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	SRPX	P78539	464 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	C17orf58	Q2M2W7	97 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	IAH1	Q2TAA2	248 aa	Predicted RBP	13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	TMEM268	Q5VZI3	342 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	TMEM65	Q6PI78	240 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	ZNF645	Q8N7E2	425 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	SLC35G3	Q8N808	338 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	OR2D2	Q9H210	308 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	GSKIP	Q9P0R6	139 aa		13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081	SLC25A10	Q9UBX3	287 aa	Predicted RBP	13.57	□□□□□ -0.24
HLA-A-208	ENST00000496081		L7N2F9	121 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	TSC22D2	O75157	780 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	SNAPC5	O75971	98 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	CDS2	O95674	445 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	WNT2	P09544	360 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	NDUFB7	P17568	137 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	OMG	P23515	440 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	LOXL3	P58215	753 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	ZNF546	Q86UE3	836 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	OR51H1	Q8NH63	302 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	JPT1	Q9UK76	154 aa		13.56	□□□□□ -0.24
HLA-A-208	ENST00000496081	KBTBD11-OT1	A0A1B0GTJ5	212 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	ADAM20	O43506	726 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	RPA2	P15927	270 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	MORN2	Q502X0	79 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	DTX2	Q86UW9	622 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	SELENOH	Q8IZQ5	122 aa	Known RBP	13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	THAP6	Q8TBB0	222 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	CORO2A	Q92828	525 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	AGMAT	Q9BSE5	352 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	RNF126	Q9BV68	326 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	RAB1B	Q9H0U4	201 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	HEXA-AS1	Q9H8Q6	139 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	GNG12	Q9UBI6	72 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	KAAG1	Q9UBP8	84 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	CLN8	Q9UBY8	286 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081		H0YIZ8	118 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	YPEL1	O60688	119 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	ZNF695	Q8IW36	515 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	FAM219A	Q8IW50	185 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	ZBTB34	Q8NCN2	500 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	C5orf30	Q96GV9	206 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	YPEL2	Q96QA6	119 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	MFF	Q9GZY8	342 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	MBD2	Q9UBB5	411 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	CTSZ	Q9UBR2	303 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	TNFSF18	Q9UNG2	199 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	TMED3	Q9Y3Q3	217 aa		13.55	□□□□□ -0.24
HLA-A-208	ENST00000496081	NDUFA2	O43678	99 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	RP2	O75695	350 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	B3GALNT1	O75752	331 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	PLA2G2A	P14555	144 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	RAB32	Q13637	225 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	OPCML	Q14982	345 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	EDARADD	Q8WWZ3	215 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	LINC00574	Q9H8X3	128 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	RAB9B	Q9NP90	201 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	PSG11	Q9UQ72	335 aa		13.54	□□□□□ -0.24
HLA-A-208	ENST00000496081	hADV38S2	A0JD32	116 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	ZNF729	A6NN14	1252 aa	Predicted RBP	13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	ST8SIA5	O15466	376 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	NDUFB3	O43676	98 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	S100A11	P31949	105 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	EIF4EBP1	Q13541	118 aa	Predicted RBP	13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	MSMO1	Q15800	293 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	TMUB2	Q71RG4	321 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	RBPMS	Q93062	196 aa	Known RBP	13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	IL22RA2	Q969J5	263 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	ABHD14B	Q96IU4	210 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	C19orf12	Q9NSK7	152 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	LINC00312	Q9Y6C7	94 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	FLNC	Q14315	2725 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	ARID1A	O14497	2285 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	DVL1	O14640	695 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	FSTL3	O95633	263 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	ZNF134	P52741	427 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	MEF2C	Q06413	473 aa	Predicted RBP	13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	LRRC10	Q5BKY1	277 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	UTF1	Q5T230	341 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	PRSS54	Q6PEW0	395 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	ITGB1BP2	Q9UKP3	347 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	LAMP3	Q9UQV4	416 aa		13.53	□□□□□ -0.24
HLA-A-208	ENST00000496081	DUXB	A0A1W2PPF3	345 aa		13.52	□□□□□ -0.25

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