RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 BLOC1S1P78537 153 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 TNFAIP6P98066 277 aaPredicted RBP5.83□□□□□ -1.48
USP39-219ENST00000496047 PAX5Q02548 391 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 COL10A1Q03692 680 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 KLRB1Q12918 225 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 ZNF266Q14584 549 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 HERPUD1Q15011 391 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 TESK1Q15569 626 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 AANATQ16613 207 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 ALKBH6Q3KRA9 238 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 SP6Q3SY56 376 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 TOR2AQ5JU69 321 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 LDLRAD3Q86YD5 345 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 DOLPP1Q86YN1 238 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 FAM219AQ8IW50 185 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 ZNF561Q8N587 486 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 GLYATL2Q8WU03 294 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 MSI2Q96DH6 328 aaKnown RBP5.83□□□□□ -1.48
USP39-219ENST00000496047 TMEM56Q96MV1 263 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 OR2V2Q96R30 315 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 TP53RKQ96S44 253 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 VKORC1Q9BQB6 163 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 WNT10AQ9GZT5 417 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 EGLN1Q9GZT9 426 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 ESRP2Q9H6T0 727 aaKnown RBP5.83□□□□□ -1.48
USP39-219ENST00000496047 OR2S2Q9NQN1 319 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 CCL28Q9NRJ3 127 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 COQ3Q9NZJ6 369 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 OR6C3Q9NZP0 311 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 OR5AC2Q9NZP5 309 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 RNF7Q9UBF6 113 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 Q9UFV3 132 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 SH3BGRL2Q9UJC5 107 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 FZR1Q9UM11 496 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 ZNF835Q9Y2P0 537 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 RCL1Q9Y2P8 373 aaKnown RBP5.83□□□□□ -1.48
USP39-219ENST00000496047 TMEM56-RWDD3S4R434 201 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 LOC400499M0QZD8 3231 aa5.83□□□□□ -1.48
USP39-219ENST00000496047 TRGV8A0A0C4DH27 118 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 A0A1B0GU03 582 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 MPTX1A8MV57 137 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 K7EM74 188 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 ADAM20O43506 726 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 SPRY3O43610 288 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 PGLYRP1O75594 196 aaPredicted RBP5.82□□□□□ -1.48
USP39-219ENST00000496047 PTBP3O95758 552 aaKnown RBP5.82□□□□□ -1.48
USP39-219ENST00000496047 NMBP08949 121 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 HKR1P10072 659 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 GZMHP20718 246 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 ZP3P21754 424 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 PRDX2P32119 198 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 CEACAM6P40199 344 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 OR3A1P47881 315 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 RAB7AP51149 207 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 HTD2P86397 168 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 BAXQ07812 192 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 IL15RAQ13261 267 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 FAM209AQ5JX71 171 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 PCSK4Q6UW60 755 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 UQCC3Q6UW78 93 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 ZNF66Q6ZN08 573 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 Q6ZR03 302 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 ZNF826PQ6ZT77 177 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 LYZL2Q7Z4W2 148 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 MOGAT3Q86VF5 341 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 STX12Q86Y82 276 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 SELENOHQ8IZQ5 122 aaKnown RBP5.82□□□□□ -1.48
USP39-219ENST00000496047 GCSAMQ8N6F7 178 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 BOLLQ8N9W6 283 aaKnown RBP5.82□□□□□ -1.48
USP39-219ENST00000496047 OR4D5Q8NGN0 318 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 OR51H1Q8NH63 302 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 ITLN1Q8WWA0 313 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 WFDC12Q8WWY7 111 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 LSM10Q969L4 123 aaKnown RBP5.82□□□□□ -1.48
USP39-219ENST00000496047 RAB39BQ96DA2 213 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 ANAPC16Q96DE5 110 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 SNRNP40Q96DI7 357 aaKnown RBP5.82□□□□□ -1.48
USP39-219ENST00000496047 SAT2Q96F10 170 aaPredicted RBP5.82□□□□□ -1.48
USP39-219ENST00000496047 FANCD2OSQ96PS1 177 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 RNF126Q9BV68 326 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 LIME1Q9H400 295 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 NCOR1P1Q9H4R4 102 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 DYNLRB1Q9NP97 96 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 FAM212BQ9NTI7 297 aaPredicted RBP5.82□□□□□ -1.48
USP39-219ENST00000496047 SDHAF2Q9NX18 166 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 TAS2R3Q9NYW6 316 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 CACFD1Q9UGQ2 172 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 NDRG3Q9UGV2 375 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 JPT1Q9UK76 154 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 NUP50Q9UKX7 468 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 DMXL2Q8TDJ6 3036 aa5.82□□□□□ -1.48
USP39-219ENST00000496047 TRGV10A0A0A0MS01 117 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 IGKV1D-13A0A0B4J2D9 117 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 IGKV1-6A0A0C4DH72 117 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 IGHV3-64DA0A0J9YX35 117 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 RAB19A4D1S5 217 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 CLEC18AA5D8T8 446 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 ZSCAN5BA6NJL1 495 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 H0YIZ8 118 aa5.81□□□□□ -1.48
USP39-219ENST00000496047 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms