RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 PRKCDQ05655 676 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 COQ5Q5HYK3 327 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 ZNF773Q6PK81 442 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 FAM183BPQ6ZVS7 135 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 C1orf64Q8NEQ6 169 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 OR1P1Q8NH06 330 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 FAM45AQ8TCE6 357 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 CASTOR1Q8WTX7 329 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 GTF2H4Q92759 462 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 SLC35B4Q969S0 331 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 HBEGFQ99075 208 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 MFSD1Q9H3U5 465 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 VSIRQ9H7M9 311 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 IMP3Q9NV31 184 aaKnown RBP3.09□□□□□ -1.91
CCDC39-207ENST00000495817 PKD1L3Q7Z443 1732 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 RGPD2P0DJD1 1756 aa3.09□□□□□ -1.91
CCDC39-207ENST00000495817 C10orf71Q711Q0 1435 aa3.09□□□□□ -1.92
CCDC39-207ENST00000495817 N4BP2Q86UW6 1770 aaPredicted RBP3.08□□□□□ -1.92
CCDC39-207ENST00000495817 UBR3Q6ZT12 1888 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 IGKV1D-17A0A075B6S4 117 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 PDCD6O75340 191 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 IGKV1-17P01599 117 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 RD3LP0DJH9 198 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 CDKN2CP42773 168 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 HSPA13P48723 471 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 GLO1Q04760 184 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 STX5Q13190 355 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 IL15RAQ13261 267 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 BIKQ13323 160 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 ENDOGQ14249 297 aaKnown RBP3.08□□□□□ -1.92
CCDC39-207ENST00000495817 TMEM249Q2WGJ8 235 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 DNAL1Q4LDG9 190 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 TTC33Q6PID6 262 aaPredicted RBP3.08□□□□□ -1.92
CCDC39-207ENST00000495817 TMEM144Q7Z5S9 345 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 ZNF738Q8NE65 137 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 OR8S1Q8NH09 359 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 OLFM3Q96PB7 478 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 C7orf50Q9BRJ6 194 aaKnown RBP3.08□□□□□ -1.92
CCDC39-207ENST00000495817 ANAPC13Q9BS18 74 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 DERL2Q9GZP9 239 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 DSN1Q9H410 356 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 TRIM45Q9H8W5 580 aaPredicted RBP3.08□□□□□ -1.92
CCDC39-207ENST00000495817 THADAQ6YHU6 1953 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 ABCB11O95342 1321 aa3.08□□□□□ -1.92
CCDC39-207ENST00000495817 TRAV8-3A0A0A6YYJ7 113 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 IGHV3-43A0A0B4J1X8 118 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 CIAO1O76071 339 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 TNFAIP8O95379 198 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 NSA2O95478 260 aaKnown RBP3.07□□□□□ -1.92
CCDC39-207ENST00000495817 CA2P00918 260 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 IGHG2P01859 326 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 GP1BAP07359 652 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 RNASE2P10153 161 aaKnown RBP3.07□□□□□ -1.92
CCDC39-207ENST00000495817 CFL1P23528 166 aaKnown RBP3.07□□□□□ -1.92
CCDC39-207ENST00000495817 ACTBP60709 375 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 RAB14P61106 215 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 ACTG1P63261 375 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 PRDX1Q06830 199 aaKnown RBP3.07□□□□□ -1.92
CCDC39-207ENST00000495817 TMEM241Q24JQ0 296 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 GOLGA7BQ2TAP0 167 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 OR10J3Q5JRS4 329 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 FAM162BQ5T6X4 162 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 SSX7Q7RTT5 188 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 AMN1Q8IY45 258 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 BOD1L2Q8IYS8 172 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 OR2M3Q8NG83 312 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 ACTL9Q8TC94 416 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 TWIST2Q8WVJ9 160 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 DRC3Q9H069 523 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 OR51B6Q9H340 312 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 URGCP-MRPS24S4R325 110 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 A0A1W2PP64 1363 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 KTN1Q86UP2 1357 aaKnown RBP3.07□□□□□ -1.92
CCDC39-207ENST00000495817 C4AP0C0L4 1744 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 MAP2P11137 1827 aaKnown RBP3.07□□□□□ -1.92
CCDC39-207ENST00000495817 KIF13BQ9NQT8 1826 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 VWA8A3KMH1 1905 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 PLXNB3Q9ULL4 1909 aa3.07□□□□□ -1.92
CCDC39-207ENST00000495817 IGHV2-26A0A0B4J1V2 119 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 FAM183AA6NL82 134 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 H3BP45 60 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 M0QXV9 152 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 ISLRO14498 428 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 TCF21O43680 179 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 PSIP1O75475 530 aaKnown RBP3.06□□□□□ -1.92
CCDC39-207ENST00000495817 SNAP29O95721 258 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 INAFM2P0DMQ5 153 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 CNTFRP26992 372 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 UGT2B10P36537 528 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 GNG10P50151 68 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 ZNF83P51522 516 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 EMP2P54851 167 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 OR10A3P58181 314 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 RAB31Q13636 194 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 MOGQ16653 247 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 DPPA2Q7Z7J5 298 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 TIAM2Q8IVF5 1701 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 SLC25A45Q8N413 288 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 RPRMLQ8N4K4 120 aa3.06□□□□□ -1.92
CCDC39-207ENST00000495817 OR2K2Q8NGT1 345 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms