RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 LRP11Q86VZ4 500 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 OR11L1Q8NGX0 322 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 LRRC20Q8TCA0 184 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 ST8SIA2Q92186 375 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 GALMQ96C23 342 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 SNX22Q96L94 193 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 MRPL37Q9BZE1 423 aaKnown RBP13.6□□□□□ -0.23
CBX4-204ENST00000495122 DNTTIP1Q9H147 329 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 SLC25A32Q9H2D1 315 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 TAF9BQ9HBM6 251 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 FAM212BQ9NTI7 297 aaPredicted RBP13.6□□□□□ -0.23
CBX4-204ENST00000495122 UFSP2Q9NUQ7 469 aa13.6□□□□□ -0.23
CBX4-204ENST00000495122 NAV3Q8IVL0 2385 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 MGST3O14880 152 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 WNT9BO14905 357 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 HSPA12AO43301 675 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 PSPNO60542 156 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 DEDDO75618 318 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 CFDP00746 253 aaPredicted RBP13.59□□□□□ -0.23
CBX4-204ENST00000495122 F2RP25116 425 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 LOXP28300 417 aaPredicted RBP13.59□□□□□ -0.23
CBX4-204ENST00000495122 PRDX2P32119 198 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 COL10A1Q03692 680 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 RAB32Q13637 225 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 ZNF695Q8IW36 515 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 TCTEX1D1Q8N7M0 179 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 WFDC11Q8NEX6 87 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 RBPMSQ93062 196 aaKnown RBP13.59□□□□□ -0.23
CBX4-204ENST00000495122 SHARPINQ9H0F6 387 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 LIN7CQ9NUP9 197 aaKnown RBP13.59□□□□□ -0.23
CBX4-204ENST00000495122 RNF7Q9UBF6 113 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 CR1P17927 2039 aa13.59□□□□□ -0.23
CBX4-204ENST00000495122 IGKV1D-13A0A0B4J2D9 117 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 E5RGE8 158 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 H0YIZ8 118 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 PGLYRP1O75594 196 aaPredicted RBP13.58□□□□□ -0.24
CBX4-204ENST00000495122 THBDP07204 575 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 IGKV1-13P0DP09 117 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 PSG2P11465 335 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 FOSL1P15407 271 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 TNFRSF1AP19438 455 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 GZMHP20718 246 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 VDAC1P21796 283 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 HTD2P86397 168 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 TNFAIP6P98066 277 aaPredicted RBP13.58□□□□□ -0.24
CBX4-204ENST00000495122 CR1LQ2VPA4 569 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 TMEM30BQ3MIR4 351 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 C22orf34Q6ZV56 151 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 WFDC8Q8IUA0 241 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 FAM71E2Q8N5Q1 922 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 GCSAMQ8N6F7 178 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 TP53RKQ96S44 253 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 ESRP2Q9H6T0 727 aaKnown RBP13.58□□□□□ -0.24
CBX4-204ENST00000495122 CCL28Q9NRJ3 127 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 GSKIPQ9P0R6 139 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 NSG2Q9Y328 171 aa13.58□□□□□ -0.24
CBX4-204ENST00000495122 CHD3Q12873 2000 aaKnown RBP13.57□□□□□ -0.24
CBX4-204ENST00000495122 DPRXA6NFQ7 191 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 MPTX1A8MV57 137 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 SPINT2O43291 252 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 ZNF737O75373 536 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 ZNF205O95201 554 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 TPT1P13693 172 aaKnown RBP13.57□□□□□ -0.24
CBX4-204ENST00000495122 MMP9P14780 707 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 IL2RGP31785 369 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 S100A10P60903 97 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 KRTAP21-3Q3LHN1 58 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 SP6Q3SY56 376 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 KRBOX4Q5JUW0 171 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 FAM209AQ5JX71 171 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 GPR157Q5UAW9 335 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 TMEM268Q5VZI3 342 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 LYZL2Q7Z4W2 148 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 SELENOHQ8IZQ5 122 aaKnown RBP13.57□□□□□ -0.24
CBX4-204ENST00000495122 OR1S1Q8NH92 325 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 ITLN1Q8WWA0 313 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 IL1F10Q8WWZ1 152 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 COQ2Q96H96 371 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 ZNF471Q9BX82 626 aaPredicted RBP13.57□□□□□ -0.24
CBX4-204ENST00000495122 FAM234AQ9H0X4 552 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 PRR13Q9NZ81 148 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 ZANQ9Y493 2812 aa13.57□□□□□ -0.24
CBX4-204ENST00000495122 CADP27708 2225 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 C12orf77C9JDV5 145 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 F5H0A9 414 aaPredicted RBP13.56□□□□□ -0.24
CBX4-204ENST00000495122 ABCD4O14678 606 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 ST8SIA3O43173 380 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 IGHV1-46P01743 117 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 MUC1P15941 1255 aaPredicted RBP13.56□□□□□ -0.24
CBX4-204ENST00000495122 GABRA2P47869 451 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 THOC7Q6I9Y2 204 aaKnown RBP13.56□□□□□ -0.24
CBX4-204ENST00000495122 EIF5AL1Q6IS14 154 aaKnown RBP13.56□□□□□ -0.24
CBX4-204ENST00000495122 ALKBH2Q6NS38 261 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 VHLLQ6RSH7 139 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 MOGAT3Q86VF5 341 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 ZNF561Q8N587 486 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 CD177Q8N6Q3 437 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 SLC35G3Q8N808 338 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 OR4D5Q8NGN0 318 aa13.56□□□□□ -0.24
CBX4-204ENST00000495122 LSM10Q969L4 123 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms