RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 LRP11Q86VZ4 500 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 LIME1Q9H400 295 aa15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 LSM5Q9Y4Y9 91 aaKnown RBP15.62■□□□□ 0.09
TSPAN4-212ENST00000494815 H7C1Q1 480 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 OR2H2O95918 312 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 SEC11BP0C7V7 166 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 DANCRP0C864 163 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 RAB5AP20339 215 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 SELENOVP59797 346 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 KRBOX4Q5JUW0 171 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 GGNBP1Q5YKI7 109 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 OR2Z1Q8NG97 314 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 MRPL30Q8TCC3 161 aaKnown RBP15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 ATP23Q9Y6H3 246 aa15.61■□□□□ 0.09
TSPAN4-212ENST00000494815 CRYM-AS1A6NIL9 109 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 M0R036 132 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 SLC33A1O00400 549 aaPredicted RBP15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 PRAMEF6Q5VXH4 476 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 ERGIC1Q969X5 290 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 MRPL24Q96A35 216 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 ISOC2Q96AB3 205 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 PARP12Q9H0J9 701 aaKnown RBP15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 PCNX1Q96RV3 2341 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 ZZEF1O43149 2961 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 TRDCB7Z8K6 153 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 CTXN2P0C2S0 81 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 ZNF880Q6PDB4 577 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 ZNF826PQ6ZT77 177 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 MOB3AQ96BX8 217 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 MALSU1Q96EH3 234 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 PPP1R14DQ9NXH3 145 aa15.6■□□□□ 0.09
TSPAN4-212ENST00000494815 C3orf80F5H4A9 247 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 THBDP07204 575 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 ZNF728P0DKX0 622 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 UCP3P55916 312 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 ZNF616Q08AN1 781 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 RHEBQ15382 184 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 VHLLQ6RSH7 139 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 MOB1BQ7L9L4 216 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 WFDC8Q8IUA0 241 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 ARL6IP6Q8N6S5 226 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 SYT3Q9BQG1 590 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 BORCS7-ASMTA0A0B4J1R7 106 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 E5RGE8 158 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 SIRPB1O00241 398 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 CLN5O75503 358 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 HAND1O96004 215 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 TK1P04183 234 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 OR8U8P0C7N1 319 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 ACP7Q6ZNF0 438 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 GAPTQ8N292 157 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 GINS3Q9BRX5 216 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 EIF5A2Q9GZV4 153 aaKnown RBP15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 UFSP2Q9NUQ7 469 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 NSG2Q9Y328 171 aa15.59■□□□□ 0.09
TSPAN4-212ENST00000494815 hCG_1809904A0A1W2PP81 198 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 A0A1W2PR64 198 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 A0A1W2PRV1 198 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 SCGB1D2O95969 90 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 LMO1P25800 156 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 CFHR2P36980 270 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 CAMLGP49069 296 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 SMIM21Q3B7S5 101 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 DMRTC2Q8IXT2 367 aaPredicted RBP15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 TCTEX1D2Q8WW35 142 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 C20orf24Q9BUV8 137 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 SHANK1Q9Y566 2161 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 UMAD1C9J7I0 102 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 GPR37O15354 613 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 DAOP14920 347 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 SULT1A1P50225 295 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 ASCL1P50553 236 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 HERV-K104P61576 105 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 ZNF497Q6ZNH5 498 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 PRR7Q8TB68 274 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 MRPL37Q9BZE1 423 aaKnown RBP15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 NGBQ9NPG2 151 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 C19orf12Q9NSK7 152 aa15.58■□□□□ 0.08
TSPAN4-212ENST00000494815 DPRXA6NFQ7 191 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 PPYP01298 95 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 SCTP09683 121 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 P2RY1P47900 373 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 OR2B11Q5JQS5 317 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 C20orf204Q6ZNR8 217 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 TOMM40LQ969M1 308 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 BSCL2Q96G97 398 aaPredicted RBP15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 TMEM68Q96MH6 324 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 TAAR3PQ9P1P4 343 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 STRAPQ9Y3F4 350 aaKnown RBP15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 PLCE1Q9P212 2302 aa15.57■□□□□ 0.08
TSPAN4-212ENST00000494815 A0A1B0GV90 55 aa15.56■□□□□ 0.08
TSPAN4-212ENST00000494815 AP4M1O00189 453 aa15.56■□□□□ 0.08
TSPAN4-212ENST00000494815 WNT9BO14905 357 aa15.56■□□□□ 0.08
TSPAN4-212ENST00000494815 GPR137BO60478 399 aa15.56■□□□□ 0.08
TSPAN4-212ENST00000494815 ZNF205O95201 554 aa15.56■□□□□ 0.08
TSPAN4-212ENST00000494815 MBPP02686 304 aaPredicted RBP15.56■□□□□ 0.08
TSPAN4-212ENST00000494815 NQO2P16083 231 aa15.56■□□□□ 0.08
TSPAN4-212ENST00000494815 RAB5CP51148 216 aa15.56■□□□□ 0.08
TSPAN4-212ENST00000494815 FAM24BQ8N5W8 94 aa15.56■□□□□ 0.08
TSPAN4-212ENST00000494815 WFDC1Q9HC57 220 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms