RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 C11orf1Q9H5F2 150 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 MBNL3Q9NUK0 354 aaKnown RBP8.69□□□□□ -1.02
SAMM50-206ENST00000494795 A6NJY4 79 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 FGF16O43320 207 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 IGKV1-5P01602 117 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 HBZP02008 142 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 APOC3P02656 99 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 UCP1P25874 307 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 NUP62P37198 522 aaPredicted RBP8.69□□□□□ -1.02
SAMM50-206ENST00000494795 RPS16P62249 146 aaKnown RBP8.69□□□□□ -1.02
SAMM50-206ENST00000494795 NKX6-1P78426 367 aaPredicted RBP8.69□□□□□ -1.02
SAMM50-206ENST00000494795 HNF4GQ14541 408 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 ZNF600Q6ZNG1 722 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 CCDC71LQ8N9Z2 235 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 NEUROG1Q92886 237 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 BCL2L14Q9BZR8 327 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 A0A1W2PPE3 182 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 KIAA1324LA8MWY0 1029 aaPredicted RBP8.69□□□□□ -1.02
SAMM50-206ENST00000494795 J3QW42 95 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 CYB5R3P00387 301 aaPredicted RBP8.69□□□□□ -1.02
SAMM50-206ENST00000494795 TIMM23BQ5SRD1 257 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 C1orf229Q6ZS94 237 aaPredicted RBP8.69□□□□□ -1.02
SAMM50-206ENST00000494795 LINC00596Q86U02 117 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 WFDC8Q8IUA0 241 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 BOD1Q96IK1 185 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 RAXQ9Y2V3 346 aa8.69□□□□□ -1.02
SAMM50-206ENST00000494795 TUBAL3A6NHL2 446 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 ABCD4O14678 606 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 ST8SIA5O15466 376 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 ST8SIA3O43173 380 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 CHST1O43916 411 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 CD80P33681 288 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 TIMP3P35625 211 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 PAX9P55771 341 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 HMGN3Q15651 99 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 KRBOX4Q5JUW0 171 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 TLNRD1Q9H1K6 362 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 OR2D2Q9H210 308 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 ZNRD1Q9P1U0 126 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 WIPI2Q9Y4P8 454 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 PROP1O75360 226 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 CRYAAP02489 173 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 THBDP07204 575 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 HOXD4P09016 255 aaPredicted RBP8.68□□□□□ -1.02
SAMM50-206ENST00000494795 ZP3P21754 424 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 NHLH1Q02575 133 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 ZNF816Q0VGE8 651 aaPredicted RBP8.68□□□□□ -1.02
SAMM50-206ENST00000494795 SRSF7Q16629 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
SAMM50-206ENST00000494795 SPINK9Q5DT21 86 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 FAM122CQ6P4D5 195 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 GFRALQ6UXV0 394 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 DNAJB11Q9UBS4 358 aa8.68□□□□□ -1.02
SAMM50-206ENST00000494795 YLPM1P49750 1951 aaKnown RBP8.68□□□□□ -1.02
SAMM50-206ENST00000494795 TMEM210A6NLX4 147 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 MED6O75586 246 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 CRYABP02511 175 aaKnown RBP8.67□□□□□ -1.02
SAMM50-206ENST00000494795 IAPPP10997 89 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 HOXB1P14653 301 aaPredicted RBP8.67□□□□□ -1.02
SAMM50-206ENST00000494795 PRDX2P32119 198 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 NKX2-1P43699 371 aaPredicted RBP8.67□□□□□ -1.02
SAMM50-206ENST00000494795 CCL8P80075 99 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 RUNX1Q01196 453 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 EWSR1Q01844 656 aaKnown RBP eCLIP8.67□□□□□ -1.02
SAMM50-206ENST00000494795 CDSNQ15517 529 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 TMED3Q9Y3Q3 217 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 E5RGE8 158 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 WRBO00258 174 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 EREGO14944 169 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 ZNF737O75373 536 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 PET100P0DJ07 73 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 LMO1P25800 156 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 GRNP28799 593 aaKnown RBP8.67□□□□□ -1.02
SAMM50-206ENST00000494795 RND3P61587 244 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 TMEM267Q0VDI3 215 aaPredicted RBP8.67□□□□□ -1.02
SAMM50-206ENST00000494795 SMCO1Q147U7 214 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 GUCA2BQ16661 112 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 ADAM5Q6NVV9 412 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
SAMM50-206ENST00000494795 HSD17B13Q7Z5P4 300 aaPredicted RBP8.67□□□□□ -1.02
SAMM50-206ENST00000494795 Q8IYB0 196 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 CMTM1Q8IZ96 169 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 MUCL1Q96DR8 90 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 PHYHIPLQ96FC7 376 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 FAM234AQ9H0X4 552 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 MED9Q9NWA0 146 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 NSG2Q9Y328 171 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 POMT1Q9Y6A1 747 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 DPRXA6NFQ7 191 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 LINC00473A8K010 186 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 CD40P25942 277 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 ZNF134P52741 427 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 ARL11Q969Q4 196 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 RIMS4Q9H426 269 aaPredicted RBP8.67□□□□□ -1.02
SAMM50-206ENST00000494795 CACNG5Q9UF02 275 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 RNF115Q9Y4L5 304 aa8.67□□□□□ -1.02
SAMM50-206ENST00000494795 CSMD2Q7Z408 3487 aa8.66□□□□□ -1.02
SAMM50-206ENST00000494795 C17orf98A8MV24 154 aa8.66□□□□□ -1.02
SAMM50-206ENST00000494795 PRSS44E7EML9 344 aa8.66□□□□□ -1.02
SAMM50-206ENST00000494795 H0Y980 276 aa8.66□□□□□ -1.02
SAMM50-206ENST00000494795 K7ENP7 123 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms