RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 SIAH2O43255 324 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 TNFRSF1AP19438 455 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 VDAC1P21796 283 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 P2RX3P56373 397 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 RAB14P61106 215 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 HTD2P86397 168 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 EIF4EBP1Q13541 118 aaPredicted RBP13.75□□□□□ -0.21
ATG4B-225ENST00000494465 CLEC18CQ8NCF0 446 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 GAFA1Q96PS6 74 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 IGKV1-39P01597 117 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 IGKV1D-39P04432 117 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 MST1LQ2TV78 715 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 ZNF645Q8N7E2 425 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 DEFB108BQ8NET1 73 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 STOML3Q8TAV4 291 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 OR2S2Q9NQN1 319 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 RNF150Q9ULK6 438 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 USF3Q68DE3 2245 aa13.75□□□□□ -0.21
ATG4B-225ENST00000494465 IGHV3-43A0A0B4J1X8 118 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 ADAM20O43506 726 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 PLAUP00749 431 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 IGHV3-43DP0DP04 118 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 GZMHP20718 246 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 NUP62P37198 522 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-225ENST00000494465 SMCO1Q147U7 214 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 ZNF585BQ52M93 769 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 FAM209AQ5JX71 171 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 ZNF788Q6ZQV5 615 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 DMBX1Q8NFW5 382 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 OR2D2Q9H210 308 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 NDRG3Q9UGV2 375 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 ANKHD1Q8IWZ3 2542 aaKnown RBP13.74□□□□□ -0.21
ATG4B-225ENST00000494465 A0A0G2JRQ6 117 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 SPINT2O43291 252 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 CD3EP07766 207 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 CGB3P0DN86 165 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 CGB7P0DN87 165 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 MUC1P15941 1255 aaPredicted RBP13.74□□□□□ -0.21
ATG4B-225ENST00000494465 GALNT11Q8NCW6 608 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 CITED4Q96RK1 184 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 NCOR1P1Q9H4R4 102 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 C11orf1Q9H5F2 150 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 RCL1Q9Y2P8 373 aaKnown RBP13.74□□□□□ -0.21
ATG4B-225ENST00000494465 POMT1Q9Y6A1 747 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 PKD1L2Q7Z442 2459 aa13.74□□□□□ -0.21
ATG4B-225ENST00000494465 VSTM5A8MXK1 200 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 E5RGE8 158 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 ST8SIA3O43173 380 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 GYPAP02724 150 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 IRF2P14316 349 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 RPL12P30050 165 aaKnown RBP13.73□□□□□ -0.21
ATG4B-225ENST00000494465 NINJ1Q92982 152 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 PHYHIPLQ96FC7 376 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 NSG2Q9Y328 171 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 EDDM3BP56851 147 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 EFNB3Q15768 340 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 ZBTB34Q8NCN2 500 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 C14orf79Q96F83 325 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 CCL13Q99616 98 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 SPIN2AQ99865 258 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 SPIN2BQ9BPZ2 258 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 AGMATQ9BSE5 352 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 SAP30LQ9HAJ7 183 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 ZFP57Q9NU63 452 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 HCFC1P51610 2035 aa13.73□□□□□ -0.21
ATG4B-225ENST00000494465 TPRP12270 2363 aaKnown RBP13.72□□□□□ -0.21
ATG4B-225ENST00000494465 MED19A0JLT2 244 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-225ENST00000494465 DEFB108AA8MXU0 73 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 SERPINE2P07093 398 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 APOBEC3AP31941 199 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-225ENST00000494465 FAM74A1Q5RGS3 127 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 ZNF665Q9H7R5 613 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 LIN7CQ9NUP9 197 aaKnown RBP13.72□□□□□ -0.21
ATG4B-225ENST00000494465 F2RL2O00254 374 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 RRASP10301 218 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 LOXL3P58215 753 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 RPL30P62888 115 aaKnown RBP13.72□□□□□ -0.21
ATG4B-225ENST00000494465 TFF3Q07654 80 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 MSMO1Q15800 293 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 CXorf66Q5JRM2 361 aaPredicted RBP13.72□□□□□ -0.21
ATG4B-225ENST00000494465 TCF23Q7RTU1 214 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 FAM216BQ8N7L0 139 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 CA5BP1Q8WTZ4 195 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 CXorf58Q96LI9 332 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 EGLN1Q9GZT9 426 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 FAM234AQ9H0X4 552 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 PLEKHA2Q9HB19 425 aa13.72□□□□□ -0.21
ATG4B-225ENST00000494465 SIGLEC5O15389 551 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 PITX3O75364 302 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 LOXP28300 417 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-225ENST00000494465 ID3Q02535 119 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 LTC4SQ16873 150 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 C17orf58Q2M2W7 97 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 ZNF808Q8N4W9 903 aaPredicted RBP13.71□□□□□ -0.21
ATG4B-225ENST00000494465 GPR146Q96CH1 333 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 PLEKHF2Q9H8W4 249 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 OR6C3Q9NZP0 311 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 JPT1Q9UK76 154 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 RNF115Q9Y4L5 304 aa13.71□□□□□ -0.21
ATG4B-225ENST00000494465 HIVEP3Q5T1R4 2406 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms