RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 LURAP1Q96LR2 239 aa2.09□□□□□ -2.08
CDC42EP3-205ENST00000494083 EXOSC4Q9NPD3 245 aaKnown RBP2.09□□□□□ -2.08
CDC42EP3-205ENST00000494083 UFSP2Q9NUQ7 469 aa2.09□□□□□ -2.08
CDC42EP3-205ENST00000494083 RNF186Q9NXI6 227 aa2.09□□□□□ -2.08
CDC42EP3-205ENST00000494083 WNT16Q9UBV4 365 aa2.09□□□□□ -2.08
CDC42EP3-205ENST00000494083 PADI3Q9ULW8 664 aa2.09□□□□□ -2.08
CDC42EP3-205ENST00000494083 A0A1B0GWA3 101 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGLC7A0M8Q6 106 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGSF23A1L1A6 192 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 MGAT4DA6NG13 374 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 LINC01619G3V211 115 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TIMM23O14925 209 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR2J3O76001 311 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CDS2O95674 445 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TIMP1P01033 207 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGKV1-39P01597 117 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGHEP01854 428 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGKV1D-39P04432 117 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 FCER2P06734 321 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 KLK1P06870 262 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SNRPCP09234 159 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TRGC1P0CF51 173 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PVALBP20472 110 aaPredicted RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 DLSTP36957 453 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CCR2P41597 374 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 MAGEB1P43366 347 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PRPS1P60891 318 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ERVK-25P63136 954 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CYCSP99999 105 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 MADCAM1Q13477 382 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 EBPQ15125 230 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TMEM69Q5SWH9 247 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 FAM46CQ5VWP2 391 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR8G2PQ6IF36 304 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TMEM14EPQ6UXP3 125 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SPATA12Q7Z6I5 190 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR1P1Q8NH06 330 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR4C3Q8NH37 302 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TERB2Q8NHR7 220 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 RNASE8Q8TDE3 154 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 LRRC29Q8WV35 223 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CCDC107Q8WV48 283 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TMEM190Q8WZ59 177 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ISOC2Q96AB3 205 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 RAB39BQ96DA2 213 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 S100A16Q96FQ6 103 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ALKBH3Q96Q83 286 aaPredicted RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ASCL2Q99929 193 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PARP12Q9H0J9 701 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 LINC00574Q9H8X3 128 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 FEZF1A0PJY2 475 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 UMAD1C9J7I0 102 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SPRY3O43610 288 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 AHSA1O95433 338 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 HPNP05981 417 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SP1P08047 785 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR4A8P0C604 315 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PIRTP0C851 137 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CPMP14384 443 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 HIST1H1DP16402 221 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 FUT3P21217 361 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 EDNRAP25101 427 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SLC6A6P31641 620 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CDAP32320 146 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PPT1P50897 306 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 IDH3GP51553 393 aaPredicted RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ARF6P62330 175 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 RHOBP62745 196 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 GUK1Q16774 197 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 HNRNPA1L2Q32P51 320 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PHYHD1Q5SRE7 291 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 C18orf63Q68DL7 685 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 RPL7L1Q6DKI1 246 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 Q6P435 159 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 C16orf82Q7Z2V1 217 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 NIT1Q86X76 327 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SAXO1Q8IYX7 474 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR51T1Q8NGJ9 327 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR5D14Q8NGL3 314 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 OR10R2Q8NGX6 335 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 CD300LFQ8TDQ1 290 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 DCUN1D4Q92564 292 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PDCD1LG2Q9BQ51 273 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 MIEN1Q9BRT3 115 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TBL1XR1Q9BZK7 514 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ARL6Q9H0F7 186 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 PARLQ9H300 379 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 RGCCQ9H4X1 137 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ZNF222Q9UK12 451 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TBX21Q9UL17 535 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 ZNF346Q9UL40 294 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 B3GALT5Q9Y2C3 310 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 WIPI2Q9Y4P8 454 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 IGKV1-27A0A075B6S5 117 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 A0A1B0GWB2 263 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 TMEM72A0PK05 275 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 A6NIZ1 184 aa2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 SRRM4A7MD48 611 aaKnown RBP2.08□□□□□ -2.08
CDC42EP3-205ENST00000494083 C1orf196B1AJZ1 125 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms