RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 MMP28Q9H239 520 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 TREM2Q9NZC2 230 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 ZDHHC8Q9ULC8 765 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 CFAP54Q96N23 3096 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 IGKV1-12A0A0C4DH73 117 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 MED19A0JLT2 244 aaPredicted RBP5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 SNRPGP15A8MWD9 76 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 MCRIP1C9JLW8 97 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 ANGPTL7O43827 346 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 SOX15O60248 233 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 SNAPC5O75971 98 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 ATG12O94817 140 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 IGKV1D-12P01611 117 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 CD3DP04234 171 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 CD3EP07766 207 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 GABRR1P24046 479 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 KCNJ3P48549 501 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 CEBPGP53567 150 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 LCN2P80188 198 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 TLE1Q04724 770 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 CHRFAM7AQ494W8 412 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 C5orf47Q569G3 176 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 ZNF787Q6DD87 383 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 HAGHLQ6PII5 290 aaPredicted RBP5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 ATRAIDQ6UW56 229 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 BPIFB2Q8N4F0 458 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 POC1AQ8NBT0 407 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 OR5H2Q8NGV7 314 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 OR4K15Q8NH41 348 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 C2CD4CQ8TF44 421 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 ASB13Q8WXK3 278 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 EMG1Q92979 244 aaKnown RBP5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 UPRTQ96BW1 309 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 CMSS1Q9BQ75 279 aaKnown RBP5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 PDCD10Q9BUL8 212 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 RCC2Q9P258 522 aaKnown RBP5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 C14orf166Q9Y224 244 aaKnown RBP5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 OSGIN2Q9Y236 505 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 NPTNQ9Y639 398 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 ALG5Q9Y673 324 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 INTS1Q8N201 2190 aaKnown RBP5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 APC2O95996 2303 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 ACACAQ13085 2346 aa5.66□□□□□ -1.5
FNDC3B-212ENST00000494000 TRBV6-6A0A0A6YYG2 114 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 A0A1W2PP11 408 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 C9orf170A2RU37 121 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 FAM74A7A6NL05 159 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 KIAA1324LA8MWY0 1029 aaPredicted RBP5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 RPLP1P05386 114 aaKnown RBP5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 SERPINE2P07093 398 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 ADH4P08319 380 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 PGA5P0DJD9 388 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 ZNF25P17030 456 aaPredicted RBP5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 BCL3P20749 454 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 MPV17P39210 176 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 TAS2R31P59538 309 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 NUTF2P61970 127 aaKnown RBP5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 SURF2Q15527 256 aaPredicted RBP5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 TAF9Q16594 264 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 FAM74A3Q4VXF1 159 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 CD276Q5ZPR3 534 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 MOB1BQ7L9L4 216 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 STPG2Q8N412 459 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 SCCPDHQ8NBX0 429 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 GATAD1Q8WUU5 269 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 MRPL24Q96A35 216 aaKnown RBP5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 TMEM56Q96MV1 263 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 KCNJ16Q9NPI9 418 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 TMEM56-RWDD3S4R434 201 aa5.65□□□□□ -1.5
FNDC3B-212ENST00000494000 TGIF2-C20orf24A0A0A6YYL0 155 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 SH2D1BO14796 132 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 GEMIN2O14893 280 aaKnown RBP5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 IFNA7P01567 189 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 SFTPBP07988 381 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 PTHLHP12272 177 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 PMCHP20382 165 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 CCKARP32238 428 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 FABP6P51161 128 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 ERVK11-1P61568 191 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 PJVKQ0ZLH3 352 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 ZNF146Q15072 292 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 TMEM144Q7Z5S9 345 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 C12orf45Q8N5I9 185 aaPredicted RBP5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 BEST4Q8NFU0 473 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 OR10AD1Q8NGE0 317 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 OR5AP2Q8NGF4 316 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 OR10W1Q8NGF6 305 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 TMEM171Q8WVE6 324 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 NARS2Q96I59 477 aaKnown RBP5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 HYLS1Q96M11 299 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 GINS4Q9BRT9 223 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 FGF23Q9GZV9 251 aaPredicted RBP5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 CLEC4MQ9H2X3 399 aaPredicted RBP5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 HEXA-AS1Q9H8Q6 139 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 ZNF286AQ9HBT8 521 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 LAMP3Q9UQV4 416 aa5.65□□□□□ -1.51
FNDC3B-212ENST00000494000 AKAP13Q12802 2813 aa5.64□□□□□ -1.51
FNDC3B-212ENST00000494000 KIR2DS1A0A191URI9 304 aa5.64□□□□□ -1.51
FNDC3B-212ENST00000494000 UBE2QL1A1L167 161 aa5.64□□□□□ -1.51
FNDC3B-212ENST00000494000 CEACAM18A8MTB9 384 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms