RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 CLDN34H7C241 214 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 CSF1P09603 554 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 RCC1P18754 421 aaPredicted RBP9.93□□□□□ -0.82
UPF3A-210ENST00000493727 LINC00310P59036 64 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 AP3S2P59780 193 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 HLA-DRB3P79483 266 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 SSBP1Q04837 148 aaKnown RBP9.93□□□□□ -0.82
UPF3A-210ENST00000493727 BAMBIQ13145 260 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 C16orf87Q6PH81 154 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 HOGA1Q86XE5 327 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 GAPTQ8N292 157 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF565Q8N9K5 539 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 BEST4Q8NFU0 473 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 OR13A1Q8NGR1 328 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 NCOR1P1Q9H4R4 102 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 Q9N2K0 584 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 ABCB10Q9NRK6 738 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 KLK11Q9UBX7 282 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 MTFP1Q9UDX5 166 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 UBE2J1Q9Y385 318 aaPredicted RBP9.93□□□□□ -0.82
UPF3A-210ENST00000493727 LINC00312Q9Y6C7 94 aa9.93□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF736B4DX44 427 aaPredicted RBP9.92□□□□□ -0.82
UPF3A-210ENST00000493727 TRDCB7Z8K6 153 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 FABP7O15540 132 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 SPINT2O43291 252 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 ENSAO43768 121 aaKnown RBP9.92□□□□□ -0.82
UPF3A-210ENST00000493727 FCN3O75636 299 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 IL7P13232 177 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 HLA-DMAP28067 261 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 SSTR5P35346 364 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 TAS2R46P59540 309 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 TAS2R19P59542 299 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 DEFA6Q01524 100 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF273Q14593 569 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 BAK1Q16611 211 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 ACTBL2Q562R1 376 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 KLF17Q5JT82 389 aaPredicted RBP9.92□□□□□ -0.82
UPF3A-210ENST00000493727 OR52W1Q6IF63 320 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF880Q6PDB4 577 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 C9orf139Q6ZV77 190 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 C1QL4Q86Z23 238 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 TOMM5Q8N4H5 51 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 OR5H2Q8NGV7 314 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 UBALD1Q8TB05 177 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 BORCS5Q969J3 196 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 ARL11Q969Q4 196 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF714Q96N38 554 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 SDHCQ99643 169 aaPredicted RBP9.92□□□□□ -0.82
UPF3A-210ENST00000493727 GAL3ST2Q9H3Q3 398 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 TAF9BQ9HBM6 251 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 TAS2R8Q9NYW2 309 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 CALYQ9NYX4 217 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 ONECUT1Q9UBC0 465 aa9.92□□□□□ -0.82
UPF3A-210ENST00000493727 RPUSD1Q9UJJ7 312 aaKnown RBP9.92□□□□□ -0.82
UPF3A-210ENST00000493727 IGHV2-70DA0A0C4DH43 119 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 LINC00854A0A1B0GVQ3 168 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 C12orf77C9JDV5 145 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 LANCL1O43813 399 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 ORC5O43913 435 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 UPK1BO75841 260 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 LIPFP07098 398 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 GZMHP20718 246 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 OR3A3P47888 321 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 BPIFB3P59826 476 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 PAX2Q02962 417 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 SRSF7Q16629 238 aaKnown RBP eCLIP9.91□□□□□ -0.82
UPF3A-210ENST00000493727 LTC4SQ16873 150 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 TMEM200BQ69YZ2 307 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 TMEM229BQ8NBD8 167 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 OR4A4PQ8NGN8 299 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 SNAPC3Q92966 411 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 TRIM63Q969Q1 353 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 UPRTQ96BW1 309 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 TAS2R3Q9NYW6 316 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 ANXA10Q9UJ72 324 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 ANAPC10Q9UM13 185 aa9.91□□□□□ -0.82
UPF3A-210ENST00000493727 RBMX2Q9Y388 322 aaKnown RBP9.91□□□□□ -0.82
UPF3A-210ENST00000493727 KBTBD11-OT1A0A1B0GTJ5 212 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 hCG_1809904A0A1W2PP81 198 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 A0A1W2PPE2 198 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 A0A1W2PR64 198 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 A0A1W2PRV1 198 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF729A6NN14 1252 aaPredicted RBP9.9□□□□□ -0.82
UPF3A-210ENST00000493727 BET1O15155 118 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 HSPA12AO43301 675 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 HBZP02008 142 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 PMP2P02689 132 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 IFNA6P05013 189 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 SCTP09683 121 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 GSTT2P0CG29 244 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 AKAIN1P0CW23 69 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 ZNF728P0DKX0 622 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 CCL3L1P16619 93 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 HRH1P35367 487 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 FAUP35544 74 aaKnown RBP9.9□□□□□ -0.82
UPF3A-210ENST00000493727 HMGN3Q15651 99 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 RNASE10Q5GAN6 216 aaKnown RBP9.9□□□□□ -0.82
UPF3A-210ENST00000493727 Q6ZPA2 131 aa9.9□□□□□ -0.82
UPF3A-210ENST00000493727 Q6ZS49 121 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms