RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 TEX29Q8N6K0 151 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 ZNF596Q8TC21 504 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 ABHD14AQ9BUJ0 271 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 RNF150Q9ULK6 438 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 ANAPC10Q9UM13 185 aa12.82□□□□□ -0.36
HPS4-216ENST00000493455 SONP18583 2426 aaKnown RBP12.82□□□□□ -0.36
HPS4-216ENST00000493455 A0A087X0M5 115 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 A0A1B0GX30 115 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 YPEL1O60688 119 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 CTXN2P0C2S0 81 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 SRD5A1P18405 259 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 NAT1P18440 290 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 CD34P28906 385 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 FCGR2CP31995 323 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 ZNF134P52741 427 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 TAS2R19P59542 299 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 TSPAN5P62079 268 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 HLA-DRB5Q30154 266 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 RNASE10Q5GAN6 216 aaKnown RBP12.81□□□□□ -0.36
HPS4-216ENST00000493455 ZNF626Q68DY1 528 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 LYG1Q8N1E2 194 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 OR11H6Q8NGC7 330 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 C17orf50Q8WW18 174 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 CREB3L1Q96BA8 519 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 YPEL2Q96QA6 119 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 TINAGL1Q9GZM7 467 aaPredicted RBP12.81□□□□□ -0.36
HPS4-216ENST00000493455 MMP28Q9H239 520 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 TMEM160Q9NX00 188 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 CDC42EP3Q9UKI2 254 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 HILPDAQ9Y5L2 63 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 HIVEP2P31629 2446 aa12.81□□□□□ -0.36
HPS4-216ENST00000493455 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 MDFIC2A0A1B0GVS7 189 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 ODF3BA8MYP8 253 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 RAB3DO95716 219 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 FSHBP01225 129 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 IFNA6P05013 189 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 HTR1DP28221 377 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 FXYD4P59646 89 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 ZNF846Q147U1 533 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 BAK1Q16611 211 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 CT45A1Q5HYN5 189 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 H1FOOQ8IZA3 346 aaPredicted RBP12.8□□□□□ -0.36
HPS4-216ENST00000493455 TOMM5Q8N4H5 51 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 GDPD1Q8N9F7 314 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 TMEM229BQ8NBD8 167 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 ZNF439Q8NDP4 499 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 OR4P4Q8NGL7 312 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 CT45A3Q8NHU0 189 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 ABHD14BQ96IU4 210 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 SDHCQ99643 169 aaPredicted RBP12.8□□□□□ -0.36
HPS4-216ENST00000493455 ZNF2Q9BSG1 426 aaPredicted RBP12.8□□□□□ -0.36
HPS4-216ENST00000493455 WDR12Q9GZL7 423 aaKnown RBP12.8□□□□□ -0.36
HPS4-216ENST00000493455 C11orf54Q9H0W9 315 aaPredicted RBP12.8□□□□□ -0.36
HPS4-216ENST00000493455 FAM96BQ9Y3D0 163 aa12.8□□□□□ -0.36
HPS4-216ENST00000493455 AMMECR1Q9Y4X0 333 aaPredicted RBP12.8□□□□□ -0.36
HPS4-216ENST00000493455 DIRAS3O95661 229 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 AMY2AP04746 511 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 OR8U9P0C7N5 309 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 AADACP22760 399 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 IL3RAP26951 378 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 REG1BP48304 166 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 HERV-K104P61576 105 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 SSBP1Q04837 148 aaKnown RBP12.79□□□□□ -0.36
HPS4-216ENST00000493455 SSX2Q16385 188 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 SCGB2B2Q4G0G5 96 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 MIDNQ504T8 468 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 ACTBL2Q562R1 376 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 STEAP1BQ6NZ63 245 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 LINC00299Q6ZSB3 139 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 SLC25A48Q6ZT89 311 aaKnown RBP12.79□□□□□ -0.36
HPS4-216ENST00000493455 BEND2Q8NDZ0 799 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 OR4D10Q8NGI6 311 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 OR8U1Q8NH10 309 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 EDARADDQ8WWZ3 215 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 TRIM63Q969Q1 353 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 SLC6A7Q99884 636 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 OR2D2Q9H210 308 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 MCUBQ9NWR8 336 aa12.79□□□□□ -0.36
HPS4-216ENST00000493455 RBMX2Q9Y388 322 aaKnown RBP12.79□□□□□ -0.36
HPS4-216ENST00000493455 ANKRD20A5PA0PJZ0 165 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 BUB1B-PAK6H3BSN5 160 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 IGLV1-47P01700 117 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 AKAIN1P0CW23 69 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 GPR12P47775 334 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 DYRK1AQ13627 763 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 DIAPH2-AS1Q14236 149 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 OVCH2Q7RTZ1 564 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 TMEM17Q86X19 198 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 OR4C16Q8NGL9 310 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 SECTM1Q8WVN6 248 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 TOMM40LQ969M1 308 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 ZDHHC16Q969W1 377 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 RPEQ96AT9 228 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 OCEL1Q9H607 264 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 ABCB10Q9NRK6 738 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 TAS2R8Q9NYW2 309 aa12.78□□□□□ -0.36
HPS4-216ENST00000493455 TBL2Q9Y4P3 447 aaKnown RBP12.78□□□□□ -0.36
HPS4-216ENST00000493455 LEUTXA8MZ59 168 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms