RNA–Protein interactions for RNA: ENST00000493207.1

RER1-208, Transcript of retention in endoplasmic reticulum sorting receptor 1, human

TSL 2

Gene RER1, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RER1-208	ENST00000493207	SRSF7	Q16629	238 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RER1-208	ENST00000493207	KRTAP24-1	Q3LI83	254 aa		13.6	□□□□□ -0.23
RER1-208	ENST00000493207	TOMM40L	Q969M1	308 aa		13.6	□□□□□ -0.23
RER1-208	ENST00000493207	RPE	Q96AT9	228 aa		13.6	□□□□□ -0.23
RER1-208	ENST00000493207	OCSTAMP	Q9BR26	566 aa		13.6	□□□□□ -0.23
RER1-208	ENST00000493207	ABHD14A	Q9BUJ0	271 aa		13.6	□□□□□ -0.23
RER1-208	ENST00000493207	ABCB10	Q9NRK6	738 aa		13.6	□□□□□ -0.23
RER1-208	ENST00000493207	VGLL3	A8MV65	326 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	ZNF701	M0R085	212 aa	Predicted RBP	13.59	□□□□□ -0.23
RER1-208	ENST00000493207	BET1	O15155	118 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	LY6E	Q16553	131 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	AANAT	Q16613	207 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	IGSF11	Q5DX21	431 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207		Q6ZS49	121 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	LAX1	Q8IWV1	398 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	OR2AK2	Q8NG84	335 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	OR5R1	Q8NH85	324 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	FAM216A	Q8WUB2	273 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	ZFAND2B	Q8WV99	257 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	GCDH	Q92947	438 aa	Predicted RBP	13.59	□□□□□ -0.23
RER1-208	ENST00000493207	DCUN1D5	Q9BTE7	237 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	CABLES2	Q9BTV7	478 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	SLIRP	Q9GZT3	109 aa	Known RBP	13.59	□□□□□ -0.23
RER1-208	ENST00000493207	VPREB3	Q9UKI3	123 aa		13.59	□□□□□ -0.23
RER1-208	ENST00000493207	MRPS7	Q9Y2R9	242 aa	Known RBP	13.59	□□□□□ -0.23
RER1-208	ENST00000493207	MEIS3P1	A6NDR6	274 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	OOSP1	A8MZH6	123 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	CTDSP2	O14595	271 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	HSD17B6	O14756	317 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	IL3RA	P26951	378 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	ARHGDIB	P52566	201 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	KRTAP21-3	Q3LHN1	58 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	LY6G6F	Q5SQ64	297 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	C16orf87	Q6PH81	154 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	LYG1	Q8N1E2	194 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	GVQW1	Q8N7I0	195 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.58	□□□□□ -0.24
RER1-208	ENST00000493207	OR10J5	Q8NHC4	309 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	PIFO	Q8TCI5	191 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	TMEM158	Q8WZ71	300 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	C6orf62	Q9GZU0	229 aa	Predicted RBP	13.58	□□□□□ -0.24
RER1-208	ENST00000493207	PARP12	Q9H0J9	701 aa	Known RBP	13.58	□□□□□ -0.24
RER1-208	ENST00000493207	MIXL1	Q9H2W2	232 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	EXTL2	Q9UBQ6	330 aa		13.58	□□□□□ -0.24
RER1-208	ENST00000493207	DPPA5	A6NC42	116 aa		13.57	□□□□□ -0.24
RER1-208	ENST00000493207	RNF212B	A8MTL3	300 aa		13.57	□□□□□ -0.24
RER1-208	ENST00000493207	ST8SIA5	O15466	376 aa		13.57	□□□□□ -0.24
RER1-208	ENST00000493207	HLA-DQB1	P01920	261 aa		13.57	□□□□□ -0.24
RER1-208	ENST00000493207	FCER2	P06734	321 aa		13.57	□□□□□ -0.24
RER1-208	ENST00000493207	REG1B	P48304	166 aa		13.57	□□□□□ -0.24
RER1-208	ENST00000493207	RAB7A	P51149	207 aa		13.57	□□□□□ -0.24
RER1-208	ENST00000493207	CCDC144NL	Q6NUI1	221 aa		13.57	□□□□□ -0.24
RER1-208	ENST00000493207	SNX29P2	Q8IUI4	249 aa		13.57	□□□□□ -0.24
RER1-208	ENST00000493207	TRBV6-7	A0A0A0MS04	114 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207		A0A1W2PPI3	338 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	FAM181B	A6NEQ2	426 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	GPR137B	O60478	399 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	GAPDH	P04406	335 aa	Known RBP	13.56	□□□□□ -0.24
RER1-208	ENST00000493207	CD24	P25063	80 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	BRS3	P32247	399 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	PRSS3	P35030	304 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	CBX5	P45973	191 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	DYNLT3	P51808	116 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.56	□□□□□ -0.24
RER1-208	ENST00000493207	HOGA1	Q86XE5	327 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	ODF3L1	Q8IXM7	274 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	BEST4	Q8NFU0	473 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	MCFD2	Q8NI22	146 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	13.56	□□□□□ -0.24
RER1-208	ENST00000493207	EDARADD	Q8WWZ3	215 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	ST6GALNAC6	Q969X2	333 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	GINS4	Q9BRT9	223 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	C19orf24	Q9BVV8	132 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	C11orf54	Q9H0W9	315 aa	Predicted RBP	13.56	□□□□□ -0.24
RER1-208	ENST00000493207	IFI27L2	Q9H2X8	130 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	IFT46	Q9NQC8	304 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	RDH8	Q9NYR8	311 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	NDUFA13	Q9P0J0	144 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	ANXA10	Q9UJ72	324 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	ADAM30	Q9UKF2	790 aa		13.56	□□□□□ -0.24
RER1-208	ENST00000493207	IGHV1-3	A0A0C4DH29	117 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	TIMM23	O14925	209 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	DIRAS3	O95661	229 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	OR3A3	P47888	321 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	ZNF137P	P52743	207 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	ARPC4	P59998	168 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	ACTG1	P63261	375 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	CNIH2	Q6PI25	160 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	TMEM219	Q86XT9	240 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	TAF15	Q92804	592 aa	Known RBP eCLIP	13.55	□□□□□ -0.24	8e-7	■■□□□ 11.8
RER1-208	ENST00000493207	DGCR14	Q96DF8	476 aa	Known RBP	13.55	□□□□□ -0.24
RER1-208	ENST00000493207	MDFI	Q99750	246 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	NXF2	Q9GZY0	626 aa	Known RBP	13.55	□□□□□ -0.24
RER1-208	ENST00000493207	TCF19	Q9Y242	345 aa		13.55	□□□□□ -0.24
RER1-208	ENST00000493207	SAA2-SAA4	A0A096LPE2	208 aa		13.54	□□□□□ -0.24
RER1-208	ENST00000493207	ITGB1BP1	O14713	200 aa		13.54	□□□□□ -0.24
RER1-208	ENST00000493207	LPL	P06858	475 aa		13.54	□□□□□ -0.24
RER1-208	ENST00000493207	SAA2	P0DJI9	122 aa	Predicted RBP	13.54	□□□□□ -0.24
RER1-208	ENST00000493207	FOXB2	Q5VYV0	432 aa		13.54	□□□□□ -0.24
RER1-208	ENST00000493207	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.54	□□□□□ -0.24

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