RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 HERPUD1Q15011 391 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 STEAP3Q658P3 488 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 VMO1Q7Z5L0 202 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 OR10A7Q8NGE5 316 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 ZFAND2BQ8WV99 257 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 DACT3Q96B18 629 aaPredicted RBP10.97□□□□□ -0.65
MSH6-208ENST00000493177 TINAGL1Q9GZM7 467 aaPredicted RBP10.97□□□□□ -0.65
MSH6-208ENST00000493177 METTL8Q9H825 291 aaKnown RBP10.97□□□□□ -0.65
MSH6-208ENST00000493177 MCUBQ9NWR8 336 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 GFOD1Q9NXC2 390 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 ZNF69Q9UC07 566 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 JPT1Q9UK76 154 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 DSCAML1Q8TD84 2053 aa10.97□□□□□ -0.65
MSH6-208ENST00000493177 CENPXA8MT69 81 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 DISC1C4P0D8 188 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 RGS11O94810 467 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 IGHV3-7P01780 117 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 RBP4P02753 201 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 CD74P04233 296 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 AMY2AP04746 511 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 NFYAP23511 347 aaPredicted RBP10.96□□□□□ -0.65
MSH6-208ENST00000493177 PPP1CCP36873 323 aaKnown RBP10.96□□□□□ -0.65
MSH6-208ENST00000493177 GNG10P50151 68 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 DLX1P56177 255 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 PAX8Q06710 450 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 MEF2DQ14814 521 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 TMEM30BQ3MIR4 351 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 FAM53AQ6NSI3 398 aaPredicted RBP10.96□□□□□ -0.65
MSH6-208ENST00000493177 FAAP20Q6NZ36 180 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 Q8N7P7 452 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 SIGLECL1Q8N7X8 197 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 OR4C16Q8NGL9 310 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 LEAP2Q969E1 77 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 LINC00574Q9H8X3 128 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 HRASLSQ9HDD0 168 aa10.96□□□□□ -0.65
MSH6-208ENST00000493177 TRBV6-7A0A0A0MS04 114 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 DIRAS3O95661 229 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 FSHBP01225 129 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 PRTN3P24158 256 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 FCGR2CP31995 323 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 BAMBIQ13145 260 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 DYRK1AQ13627 763 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 SCGB2B2Q4G0G5 96 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 VAX1Q5SQQ9 334 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 GPR157Q5UAW9 335 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 C1orf122Q6ZSJ8 110 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 OVCH2Q7RTZ1 564 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 TMEM17Q86X19 198 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 PDZD9Q8IXQ8 264 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 PNKDQ8N490 385 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 C11orf42Q8N5U0 333 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 OR4D10Q8NGI6 311 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 OR52M1Q8NGK5 317 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 OR13D1Q8NGV5 346 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 OR56B4Q8NH76 319 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 ZNF2Q9BSG1 426 aaPredicted RBP10.95□□□□□ -0.66
MSH6-208ENST00000493177 SIRPDQ9H106 197 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 TMEM133Q9H2Q1 129 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 HEXA-AS1Q9H8Q6 139 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 RDH8Q9NYR8 311 aa10.95□□□□□ -0.66
MSH6-208ENST00000493177 RBM7Q9Y580 266 aaKnown RBP10.95□□□□□ -0.66
MSH6-208ENST00000493177 A0A1W2PPE3 182 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 TOR1AO14656 332 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 YPEL1O60688 119 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 IGHV4-38-2P0DP08 117 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 MMP9P14780 707 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 LOXL3P58215 753 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 FXYD4P59646 89 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 HERV-K104P61576 105 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 KLRD1Q13241 179 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 MORN2Q502X0 79 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 KLF17Q5JT82 389 aaPredicted RBP10.94□□□□□ -0.66
MSH6-208ENST00000493177 H1FOOQ8IZA3 346 aaPredicted RBP10.94□□□□□ -0.66
MSH6-208ENST00000493177 ABHD12Q8N2K0 398 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 OR6F1Q8NGZ6 308 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 FAM216AQ8WUB2 273 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 LHX4Q969G2 390 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 ZDHHC16Q969W1 377 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 UPRTQ96BW1 309 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 DUX5Q96PT3 197 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 YPEL2Q96QA6 119 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 TBX15Q96SF7 602 aa10.94□□□□□ -0.66
MSH6-208ENST00000493177 C7orf50Q9BRJ6 194 aaKnown RBP10.94□□□□□ -0.66
MSH6-208ENST00000493177 A0A1W2PRD5 423 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 A0A1W2PRF3 423 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 A0A1W2PRM7 423 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 NAP1L6A6NFF2 107 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 LYRM1O43325 122 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 AADACP22760 399 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 DEFA1P59665 94 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 DEFA3P59666 94 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 IFITM3Q01628 133 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 DCTN2Q13561 401 aaKnown RBP10.93□□□□□ -0.66
MSH6-208ENST00000493177 UTF1Q5T230 341 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 NCR3LG1Q68D85 454 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 BCL6BQ8N143 479 aaPredicted RBP10.93□□□□□ -0.66
MSH6-208ENST00000493177 ARRDC1Q8N5I2 433 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 OR2AK2Q8NG84 335 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 EDARADDQ8WWZ3 215 aa10.93□□□□□ -0.66
MSH6-208ENST00000493177 DEDD2Q8WXF8 326 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms