RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 IGFBP2P18065 325 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 FBN2P35556 2912 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 AP2S1P53680 142 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-219ENST00000491128 ZNF273Q14593 569 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 C11orf71Q6IPW1 123 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 PPP1R35Q8TAP8 253 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 OR2D2Q9H210 308 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 GNG12Q9UBI6 72 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 PSG11Q9UQ72 335 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 TENM4Q6N022 2769 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 C3orf85A0A1B0GTC6 90 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 A6NNC1 897 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 GPR31O00270 319 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 DVL1O14640 695 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 GIPP09681 153 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-219ENST00000491128 LUMP51884 338 aaPredicted RBP11.53□□□□□ -0.56
SMPD4-219ENST00000491128 ZNF134P52741 427 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 COQ8AQ8NI60 647 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 NINJ1Q92982 152 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 C5orf30Q96GV9 206 aa11.53□□□□□ -0.56
SMPD4-219ENST00000491128 SPINT2O43291 252 aa11.52□□□□□ -0.56
SMPD4-219ENST00000491128 PGLYRP1O75594 196 aaPredicted RBP11.52□□□□□ -0.56
SMPD4-219ENST00000491128 ECI1P42126 302 aa11.52□□□□□ -0.56
SMPD4-219ENST00000491128 UCP3P55916 312 aa11.52□□□□□ -0.56
SMPD4-219ENST00000491128 TMEM187Q14656 261 aa11.52□□□□□ -0.56
SMPD4-219ENST00000491128 IZUMO4Q1ZYL8 232 aa11.52□□□□□ -0.56
SMPD4-219ENST00000491128 C17orf58Q2M2W7 97 aa11.52□□□□□ -0.56
SMPD4-219ENST00000491128 PPP1R1CQ8WVI7 109 aa11.52□□□□□ -0.56
SMPD4-219ENST00000491128 CALYQ9NYX4 217 aa11.52□□□□□ -0.56
SMPD4-219ENST00000491128 MALRD1Q5VYJ5 2156 aa11.52□□□□□ -0.57
SMPD4-219ENST00000491128 TRAV14DV4A0A0A6YYC5 116 aa11.52□□□□□ -0.57
SMPD4-219ENST00000491128 SLC31A2O15432 143 aa11.52□□□□□ -0.57
SMPD4-219ENST00000491128 NXPH3O95157 252 aa11.52□□□□□ -0.57
SMPD4-219ENST00000491128 NRGNQ92686 78 aa11.52□□□□□ -0.57
SMPD4-219ENST00000491128 FAM234AQ9H0X4 552 aa11.52□□□□□ -0.57
SMPD4-219ENST00000491128 KCNIP3Q9Y2W7 256 aa11.52□□□□□ -0.57
SMPD4-219ENST00000491128 YLPM1P49750 1951 aaKnown RBP11.52□□□□□ -0.57
SMPD4-219ENST00000491128 ARPC5O15511 151 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 PPIHO43447 177 aaKnown RBP11.51□□□□□ -0.57
SMPD4-219ENST00000491128 COL8A1P27658 744 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 GNG10P50151 68 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 RAP2BP61225 183 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 RPL31P62899 125 aaKnown RBP11.51□□□□□ -0.57
SMPD4-219ENST00000491128 PRAMEF5Q5TYX0 476 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 C9orf62Q8N4C0 152 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 DRAM1Q8N682 238 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 OR5D13Q8NGL4 314 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 LURAP1Q96LR2 239 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 RAB1BQ9H0U4 201 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 UBE2J1Q9Y385 318 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-219ENST00000491128 KMT2BQ9UMN6 2715 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-219ENST00000491128 LOC105371267A0A1B0GV96 52 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 NKX6-3A6NJ46 265 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 DAOP14920 347 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 ERP29P30040 261 aaKnown RBP11.51□□□□□ -0.57
SMPD4-219ENST00000491128 LGALSLQ3ZCW2 172 aaPredicted RBP11.51□□□□□ -0.57
SMPD4-219ENST00000491128 TMEM268Q5VZI3 342 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 GGNBP1Q5YKI7 109 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 IQCF2Q8IXL9 164 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 MSI2Q96DH6 328 aaKnown RBP11.51□□□□□ -0.57
SMPD4-219ENST00000491128 C14orf79Q96F83 325 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 HYLS1Q96M11 299 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 ZFHX3Q15911 3703 aa11.51□□□□□ -0.57
SMPD4-219ENST00000491128 USP9YO00507 2555 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-219ENST00000491128 GZMHP20718 246 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 GSG1LQ6UXU4 331 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 CMTM1Q8IZ96 169 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 FAM185AQ8N0U4 392 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 SLC35G3Q8N808 338 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 TRAF4Q9BUZ4 470 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-219ENST00000491128 SLA2Q9H6Q3 261 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 RANBP3Q9H6Z4 567 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-219ENST00000491128 CELSR1Q9NYQ6 3014 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 ARHGAP32A7KAX9 2087 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 TRGV10A0A0A0MS01 117 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 TNFRSF13BO14836 293 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-219ENST00000491128 CRYZL1O95825 349 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 SCGB1D2O95969 90 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 PPOXP50336 477 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 LOXL3P58215 753 aa11.5□□□□□ -0.57
SMPD4-219ENST00000491128 C1orf229Q6ZS94 237 aaPredicted RBP11.5□□□□□ -0.57
SMPD4-219ENST00000491128 NDUFB3O43676 98 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 RP2O75695 350 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 CXCL2P19875 107 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 RPL30P62888 115 aaKnown RBP11.49□□□□□ -0.57
SMPD4-219ENST00000491128 IAH1Q2TAA2 248 aaPredicted RBP11.49□□□□□ -0.57
SMPD4-219ENST00000491128 MORN2Q502X0 79 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 RPL39P5Q59GN2 51 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 TMEM200BQ69YZ2 307 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 CCDC71LQ8N9Z2 235 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 OR6C3Q9NZP0 311 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 NPIPB11E5RHQ5 1161 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 Q3ZCU0 254 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 LPCAT3Q6P1A2 487 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 LIAT1Q6ZQX7 453 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 SUN5Q8TC36 379 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 GALNT14Q96FL9 552 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 AGMATQ9BSE5 352 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 ABCA12Q86UK0 2595 aa11.49□□□□□ -0.57
SMPD4-219ENST00000491128 KBTBD11-OT1A0A1B0GTJ5 212 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms