RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 HLA-AP01891 365 aaKnown RBP2.22□□□□□ -2.05
UBXN4-208ENST00000490163 IFNW1P05000 195 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ARG1P05089 322 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 SDC1P18827 310 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 S100A3P33764 101 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 IFNGR2P38484 337 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 SULT1A1P50225 295 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 FOXA1P55317 472 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 MLF1P58340 268 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 SELENOTP62341 195 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF92Q03936 586 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 BCL2L1Q07817 233 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 TPBGQ13641 420 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF774Q6NX45 483 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 DUX4L9Q6RFH8 374 aaPredicted RBP2.22□□□□□ -2.05
UBXN4-208ENST00000490163 C11orf53Q8IXP5 236 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF664Q8N3J9 261 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 SLC35G3Q8N808 338 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ZFP41Q8N8Y5 198 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 Q8N9P0 234 aaPredicted RBP2.22□□□□□ -2.05
UBXN4-208ENST00000490163 C11orf72Q8NBR9 251 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 OR4F15Q8NGB8 312 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 OR4E2Q8NGC2 313 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 OR5D18Q8NGL1 313 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 OR2A1Q8NGT9 310 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 PIGXQ8TBF5 258 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 SLC35E1Q96K37 410 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 TEAD3Q99594 435 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 AIF1LQ9BQI0 150 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ATG5Q9H1Y0 275 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ARV1Q9H2C2 271 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 CLEC5AQ9NY25 188 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ZFP30Q9Y2G7 519 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 PYGO1Q9Y3Y4 419 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 IGLV4-3A0A075B6K6 122 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 A0A1B0GV72 72 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 F6UZH7 168 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 K7EP13 123 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 K7ERU9 68 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 M0QXV9 152 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 GABRPO00591 440 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 AGPAT2O15120 278 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 SOD1P00441 154 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 GCGP01275 180 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 IFNA21P01568 189 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 BCHEP06276 602 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 OR5AC1P0C628 307 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 LAMP1P11279 417 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 CHRNB4P30926 498 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 KDELR2P33947 212 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 HRH1P35367 487 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 RAB7AP51149 207 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 CAV2P51636 162 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 FGF8P55075 233 aaPredicted RBP2.22□□□□□ -2.05
UBXN4-208ENST00000490163 TPI1P60174 286 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 RPL38P63173 70 aaKnown RBP2.22□□□□□ -2.05
UBXN4-208ENST00000490163 SRPXP78539 464 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 FABP5Q01469 135 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF345Q14585 488 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ACOT7LQ6ZUV0 252 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 SLC35F2Q8IXU6 374 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF100Q8IYN0 542 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF567Q8N184 647 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ACBD7Q8N6N7 88 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 C15orf56Q8N910 161 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 THEM6Q8WUY1 208 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 C1orf147Q96MC9 270 aaPredicted RBP2.22□□□□□ -2.05
UBXN4-208ENST00000490163 TP53RKQ96S44 253 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ATP5SQ99766 215 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 TCEAL2Q9H3H9 227 aaPredicted RBP2.22□□□□□ -2.05
UBXN4-208ENST00000490163 TUBB1Q9H4B7 451 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 CISHQ9NSE2 258 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 SLC25A37Q9NYZ2 338 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 STYXL1Q9Y6J8 313 aa2.22□□□□□ -2.05
UBXN4-208ENST00000490163 YLPM1P49750 1951 aaKnown RBP2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ARHGEF17Q96PE2 2063 aaPredicted RBP2.22□□□□□ -2.05
UBXN4-208ENST00000490163 ANAPC1Q9H1A4 1944 aa2.21□□□□□ -2.05
UBXN4-208ENST00000490163 A0A087WUJ7 227 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 CCL15-CCL14A0A0B4J2E2 113 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TMEM269A0A1B0GVZ9 245 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 IFITM10A6NMD0 228 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF705FA8MVS1 300 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TMEM250H0YL14 139 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 SOCS3O14543 225 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ADAP1O75689 374 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ATP5LO75964 103 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF705DP0CH99 300 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 ZNF705BP0CI00 300 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 CELP19835 753 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PFN2P35080 140 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 MAGEA5P43359 124 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 CAPZBP47756 277 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 DVL1P1P54792 670 aaPredicted RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 NANOS2P60321 138 aaKnown RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 SNRPGP62308 76 aaKnown RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 PTGES3Q15185 160 aaKnown RBP2.21□□□□□ -2.06
UBXN4-208ENST00000490163 CCL15Q16663 113 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 NSUN5P1Q3KNT7 163 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 TTLL9Q3SXZ7 439 aa2.21□□□□□ -2.06
UBXN4-208ENST00000490163 RFLNAQ6ZTI6 216 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms