RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PPP1R1AQ13522 171 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 ABCA11PQ4W5N1 156 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 MORN2Q502X0 79 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 C4orf46Q504U0 113 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 ESCO2Q56NI9 601 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 CD276Q5ZPR3 534 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 LYG2Q86SG7 212 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 CCDC71LQ8N9Z2 235 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 ZNF431Q8TF32 576 aaPredicted RBP11.65□□□□□ -0.54
VPS26A-205ENST00000489656 SECTM1Q8WVN6 248 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 AKR1E2Q96JD6 320 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 PARP12Q9H0J9 701 aaKnown RBP11.65□□□□□ -0.54
VPS26A-205ENST00000489656 SLC2A9Q9NRM0 540 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 GNG12Q9UBI6 72 aa11.65□□□□□ -0.54
VPS26A-205ENST00000489656 WNK2Q9Y3S1 2297 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 IGHV3-43A0A0B4J1X8 118 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 C9orf170A2RU37 121 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 CRYM-AS1A6NIL9 109 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 KIAA1324LA8MWY0 1029 aaPredicted RBP11.64□□□□□ -0.55
VPS26A-205ENST00000489656 IGHV3-43DP0DP04 118 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 CCL3L1P16619 93 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 AKR1C4P17516 323 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 PI3P19957 117 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 DNASE1P24855 282 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 PIGPP57054 158 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 SUPT4H1P63272 117 aaKnown RBP11.64□□□□□ -0.55
VPS26A-205ENST00000489656 CBX3Q13185 183 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 ZNF818PQ6ZRF7 136 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 ZBTB34Q8NCN2 500 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 ZNF439Q8NDP4 499 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 BVESQ8NE79 360 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 CLDND2Q8NHS1 167 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 RAB39BQ96DA2 213 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 MBD6Q96DN6 1003 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 GALNT14Q96FL9 552 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 PERPQ96FX8 193 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 ABCA12Q86UK0 2595 aa11.64□□□□□ -0.55
VPS26A-205ENST00000489656 NBPF19A0A087WUL8 3843 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 A0A087X0M5 115 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 A0A0B4J2A0 478 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 PPIAL4CA0A0B4J2A2 164 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 A0A1B0GX30 115 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 C22orf46C9J442 243 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 SFT2D2O95562 160 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 DUS4LO95620 317 aaKnown RBP11.63□□□□□ -0.55
VPS26A-205ENST00000489656 IGLV2-14P01704 120 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 HLA-AP01891 365 aaKnown RBP11.63□□□□□ -0.55
VPS26A-205ENST00000489656 LIPFP07098 398 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 OR8U9P0C7N5 309 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 PPIAL4GP0DN37 164 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 OMGP23515 440 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 RAB7AP51149 207 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 PRAMEF5Q5TYX0 476 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 C11orf88Q6PI97 169 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 KCTD9Q7L273 389 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 SGPP2Q8IWX5 399 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 CMTM1Q8IZ96 169 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 C11orf42Q8N5U0 333 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 ZNF645Q8N7E2 425 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 C8orf31Q8N9H6 132 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 OR2AK2Q8NG84 335 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 OR52B4Q8NGK2 314 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 OR8U1Q8NH10 309 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 MITD1Q8WV92 249 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 DACT3Q96B18 629 aaPredicted RBP11.63□□□□□ -0.55
VPS26A-205ENST00000489656 AGMATQ9BSE5 352 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 MED28Q9H204 178 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 NARFLQ9H6Q4 476 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 NAA60Q9H7X0 242 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 CCL28Q9NRJ3 127 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 SHPKQ9UHJ6 478 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 GAB2Q9UQC2 676 aa11.63□□□□□ -0.55
VPS26A-205ENST00000489656 POLR3KQ9Y2Y1 108 aaPredicted RBP11.63□□□□□ -0.55
VPS26A-205ENST00000489656 CR1P17927 2039 aa11.62□□□□□ -0.55
VPS26A-205ENST00000489656 LOC105371242A0A075B767 164 aa11.62□□□□□ -0.55
VPS26A-205ENST00000489656 PHF1O43189 567 aaPredicted RBP11.62□□□□□ -0.55
VPS26A-205ENST00000489656 MMP23AO75900 390 aa11.62□□□□□ -0.55
VPS26A-205ENST00000489656 SLC25A16P16260 332 aa11.62□□□□□ -0.55
VPS26A-205ENST00000489656 S100GP29377 79 aa11.62□□□□□ -0.55
VPS26A-205ENST00000489656 LTC4SQ16873 150 aa11.62□□□□□ -0.55
VPS26A-205ENST00000489656 DEFB113Q30KQ7 82 aa11.62□□□□□ -0.55
VPS26A-205ENST00000489656 FAM53AQ6NSI3 398 aaPredicted RBP11.62□□□□□ -0.55
VPS26A-205ENST00000489656 ZNF596Q8TC21 504 aa11.62□□□□□ -0.55
VPS26A-205ENST00000489656 RTN4IP1Q8WWV3 396 aaPredicted RBP11.62□□□□□ -0.55
VPS26A-205ENST00000489656 NEURL2Q9BR09 285 aa11.62□□□□□ -0.55
VPS26A-205ENST00000489656 RBM7Q9Y580 266 aaKnown RBP11.62□□□□□ -0.55
VPS26A-205ENST00000489656 FASNP49327 2511 aaKnown RBP11.61□□□□□ -0.55
VPS26A-205ENST00000489656 IGHV4-30-2A0A087WSY4 118 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 hCG_1809904A0A1W2PP81 198 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 A0A1W2PPE2 198 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 A0A1W2PR64 198 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 A0A1W2PRV1 198 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 M0R1W7 72 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 HSD17B6O14756 317 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 MPPED1O15442 326 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 SSNA1O43805 119 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 B3GALNT1O75752 331 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 SULT1A3P0DMM9 295 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 SULT1A4P0DMN0 295 aa11.61□□□□□ -0.55
VPS26A-205ENST00000489656 IGHV1-8P0DP01 117 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms