RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 KCNJ3P48549 501 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 UBE2E1P51965 193 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 GRK1Q15835 563 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 ZFP69Q49AA0 526 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 RNASE12Q5GAN4 147 aaKnown RBP8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 SLC35E4Q6ICL7 350 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 STEAP1BQ6NZ63 245 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 ZNF782Q6ZMW2 699 aaPredicted RBP8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 TCTE3Q8IZS6 198 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 FAM185AQ8N0U4 392 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 OR6F1Q8NGZ6 308 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 TNFRSF14Q92956 283 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 SNAPC3Q92966 411 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 SCGB3A2Q96PL1 93 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 OCSTAMPQ9BR26 566 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 CHIAQ9BZP6 476 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 C12orf4Q9NQ89 552 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 TNFRSF19Q9NS68 423 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 MBNL3Q9NUK0 354 aaKnown RBP8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 NUDT15Q9NV35 164 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 ZNF230Q9UIE0 474 aaPredicted RBP8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 KIF25Q9UIL4 384 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 MMP24Q9Y5R2 645 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 ALG5Q9Y673 324 aa8.61□□□□□ -1.03
SCAMP4-208ENST00000489554 TRAV39A0A0B4J263 110 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 hCG_1809904A0A1W2PP81 198 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 A0A1W2PPE2 198 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 A0A1W2PR64 198 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 A0A1W2PRV1 198 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 BTBD17A6NE02 478 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 SNRPGP15A8MWD9 76 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 ZNF736B4DX44 427 aaPredicted RBP8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 BOLA2-SMG1P6H3BVE0 249 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 NDUFB6O95139 128 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 NDUFA7O95182 113 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 RCC1P18754 421 aaPredicted RBP8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 DTYMKP23919 212 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 IER3P46695 156 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 MECP2P51608 486 aaKnown RBP8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 P2RX3P56373 397 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 GNG2P59768 71 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 RPL31P62899 125 aaKnown RBP8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 RBM39Q14498 530 aaKnown RBP8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 TRAPPC6BQ86SZ2 158 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 OR13A1Q8NGR1 328 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 OR4F5Q8NH21 305 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 OR4K15Q8NH41 348 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 ASB13Q8WXK3 278 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 MAFIPQ8WZ33 124 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 PRRT1Q99946 306 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 CMSS1Q9BQ75 279 aaKnown RBP8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 ALX4Q9H161 411 aaPredicted RBP8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 C20orf85Q9H1P6 137 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 OR51J1Q9H342 316 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 NCOR1P1Q9H4R4 102 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 Q9N2K0 584 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 IFT46Q9NQC8 304 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 C19orf12Q9NSK7 152 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 TENM1Q9UKZ4 2725 aa8.6□□□□□ -1.03
SCAMP4-208ENST00000489554 KIAA2026Q5HYC2 2103 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 TRAV6A0A075B6T7 132 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 TMEM30CPA0ZSE6 113 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 ODAMA1E959 279 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 MEX3AA1L020 520 aaKnown RBP8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 RAB3DO95716 219 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 IGHV4-59P01825 116 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 IFNA6P05013 189 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 MDKP21741 143 aaPredicted RBP8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 BTCP35070 178 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 SAA4P35542 130 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 DLX6P56179 175 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 MRPS15P82914 257 aaKnown RBP8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 KLRD1Q13241 179 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 ARFRP1Q13795 201 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 EDDM3AQ14507 147 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 ZNF273Q14593 569 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 HMGN3Q15651 99 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 SRSF7Q16629 238 aaKnown RBP eCLIP8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 MIDNQ504T8 468 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 KRBOX4Q5JUW0 171 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 TMEM200BQ69YZ2 307 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 Q6ZS49 121 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 TMEM17Q86X19 198 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 HOGA1Q86XE5 327 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 ZBTB8BQ8NAP8 495 aaPredicted RBP8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 NEK7Q8TDX7 302 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 RANBP3Q9H6Z4 567 aaPredicted RBP8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 HEXA-AS1Q9H8Q6 139 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 BEX1Q9HBH7 125 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 C1RLQ9NZP8 487 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 ZNRD1Q9P1U0 126 aa8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 PAIP2BQ9ULR5 123 aaKnown RBP8.59□□□□□ -1.03
SCAMP4-208ENST00000489554 IGKV1-6A0A0C4DH72 117 aa8.58□□□□□ -1.04
SCAMP4-208ENST00000489554 A0A1W2PRD5 423 aa8.58□□□□□ -1.04
SCAMP4-208ENST00000489554 A0A1W2PRF3 423 aa8.58□□□□□ -1.04
SCAMP4-208ENST00000489554 A0A1W2PRM7 423 aa8.58□□□□□ -1.04
SCAMP4-208ENST00000489554 C12orf77C9JDV5 145 aa8.58□□□□□ -1.04
SCAMP4-208ENST00000489554 C15orf65H3BRN8 121 aa8.58□□□□□ -1.04
SCAMP4-208ENST00000489554 SSNA1O43805 119 aa8.58□□□□□ -1.04
SCAMP4-208ENST00000489554 GPR137BO60478 399 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms