RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CRXO43186 299 aaPredicted RBP15.27■□□□□ 0.03
NPHP4-209ENST00000489180 PRDX2P32119 198 aa15.27■□□□□ 0.03
NPHP4-209ENST00000489180 KCNE5Q9UJ90 142 aa15.27■□□□□ 0.03
NPHP4-209ENST00000489180 WIPI2Q9Y4P8 454 aa15.27■□□□□ 0.03
NPHP4-209ENST00000489180 PXMP4Q9Y6I8 212 aa15.27■□□□□ 0.03
NPHP4-209ENST00000489180 DSPPQ9NZW4 1301 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 TGIF2-C20orf24A0A0A6YYL0 155 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 IFITM10A6NMD0 228 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 PIN1P1O15428 100 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 ADAM11O75078 769 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 HIST1H1EP10412 219 aaKnown RBP15.26■□□□□ 0.03
NPHP4-209ENST00000489180 FAM27BQ5VT28 67 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 C1orf53Q5VUE5 145 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 PAXXQ9BUH6 204 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 CDX4O14627 284 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-209ENST00000489180 TCF21O43680 179 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 H2BFSP57053 126 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 DCAF10Q5QP82 559 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 DGAT2L7PQ6IED9 249 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 OR1L8Q8NGR8 309 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 ZNF501Q96CX3 271 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-209ENST00000489180 MS4A3Q96HJ5 214 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 PILRAQ9UKJ1 303 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 LY75O60449 1722 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 H3BVH4 76 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 CEBPDP49716 269 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-209ENST00000489180 CEACAM21Q3KPI0 293 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 RAB24Q969Q5 203 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 ZNF552Q9H707 407 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-209ENST00000489180 HSPB8Q9UJY1 196 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 A0A0U1RQV5 110 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 CYB5R3P00387 301 aaPredicted RBP15.26■□□□□ 0.03
NPHP4-209ENST00000489180 ECSCRQ19T08 205 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 LAIR2Q6ISS4 152 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 ZNF841Q6ZN19 808 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 BPIFA4PQ86YQ2 179 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 PCGF1Q9BSM1 259 aa15.26■□□□□ 0.03
NPHP4-209ENST00000489180 TEX30Q5JUR7 227 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 INO80CQ6PI98 192 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-209ENST00000489180 WFDC3Q8IUB2 231 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 OR52M1Q8NGK5 317 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 UBTD1Q9HAC8 227 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 HBZP02008 142 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 CD99P14209 185 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 SNRNP40Q96DI7 357 aaKnown RBP15.25■□□□□ 0.03
NPHP4-209ENST00000489180 SLC25A10Q9UBX3 287 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-209ENST00000489180 MAP1BP46821 2468 aaKnown RBP15.25■□□□□ 0.03
NPHP4-209ENST00000489180 ZNF207O43670 478 aaKnown RBP15.25■□□□□ 0.03
NPHP4-209ENST00000489180 TSPAN2O60636 221 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 GBGT1Q8N5D6 347 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 TMEM222Q9H0R3 208 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 CTSBP07858 339 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 WDR25Q64LD2 544 aaPredicted RBP15.25■□□□□ 0.03
NPHP4-209ENST00000489180 SH3BGRL3Q9H299 93 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 RBKSQ9H477 322 aa15.25■□□□□ 0.03
NPHP4-209ENST00000489180 H0YL77 283 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 CA11O75493 328 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 MFAP2P55001 183 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 SRSF9Q13242 221 aaKnown RBP eCLIP15.24■□□□□ 0.03
NPHP4-209ENST00000489180 AQP3Q92482 292 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 EAF1Q96JC9 268 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-209ENST00000489180 OR4C12Q96R67 309 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 IGLV1-36A0A0B4J1U3 117 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 MMDQ15546 238 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 SNAI3Q3KNW1 292 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 GMPPAQ96IJ6 420 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-209ENST00000489180 RHOVQ96L33 236 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 HSPB9Q9BQS6 159 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 OR2H2O95918 312 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 PLAUP00749 431 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 RBPMS2Q6ZRY4 209 aaKnown RBP15.24■□□□□ 0.03
NPHP4-209ENST00000489180 CCL13Q99616 98 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 CRISPLD2Q9H0B8 497 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 WDR54Q9H977 334 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 SF3B6Q9Y3B4 125 aaKnown RBP15.24■□□□□ 0.03
NPHP4-209ENST00000489180 H0Y980 276 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 HPRT1P00492 218 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 BRS3P32247 399 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 CD200R1LQ6Q8B3 271 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 ZNF826PQ6ZT77 177 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 KCNK17Q96T54 332 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 TLNRD1Q9H1K6 362 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 LPAR2Q9HBW0 351 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 C21orf140B9A014 251 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 C5orf67F2Z3F1 127 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 FGF12P61328 243 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 CCL8P80075 99 aa15.24■□□□□ 0.03
NPHP4-209ENST00000489180 LBHQ53QV2 105 aaPredicted RBP15.24■□□□□ 0.03
NPHP4-209ENST00000489180 ERGP11308 486 aa15.23■□□□□ 0.03
NPHP4-209ENST00000489180 NMUP48645 174 aa15.23■□□□□ 0.03
NPHP4-209ENST00000489180 LYRM7Q5U5X0 104 aa15.23■□□□□ 0.03
NPHP4-209ENST00000489180 OR5R1Q8NH85 324 aa15.23■□□□□ 0.03
NPHP4-209ENST00000489180 IL19Q9UHD0 177 aa15.23■□□□□ 0.03
NPHP4-209ENST00000489180 HIGD1AQ9Y241 93 aa15.23■□□□□ 0.03
NPHP4-209ENST00000489180 IGHV3-72A0A0B4J1Y9 119 aa15.23■□□□□ 0.03
NPHP4-209ENST00000489180 ADIPOR1Q96A54 375 aa15.23■□□□□ 0.03
NPHP4-209ENST00000489180 ZNF385CQ66K41 422 aaPredicted RBP15.23■□□□□ 0.03
NPHP4-209ENST00000489180 GAPDHP04406 335 aaKnown RBP15.23■□□□□ 0.03
NPHP4-209ENST00000489180 RPL31P62899 125 aaKnown RBP15.23■□□□□ 0.03
NPHP4-209ENST00000489180 SERF2P84101 59 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms