RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 SERPINA2P20848 420 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 PLGLAQ15195 96 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 C6orf183Q5T699 404 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 LINC00596Q86U02 117 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 Q8N402 240 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 RPP25LQ8N5L8 163 aaKnown RBP12.27□□□□□ -0.45
USP48-210ENST00000489108 CLCC1Q96S66 551 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 PDCD1LG2Q9BQ51 273 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 ABHD14AQ9BUJ0 271 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 MED4Q9NPJ6 270 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 IL36GQ9NZH8 169 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 ADAM30Q9UKF2 790 aa12.27□□□□□ -0.45
USP48-210ENST00000489108 SNRPBP14678 240 aaKnown RBP12.26□□□□□ -0.45
USP48-210ENST00000489108 CALB2P22676 271 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 PPP1CCP36873 323 aaKnown RBP12.26□□□□□ -0.45
USP48-210ENST00000489108 CD81P60033 236 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 FLOT2Q14254 428 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 ZNF833PQ6ZTB9 187 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 OR5AK2Q8NH90 309 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 MRPS24Q96EL2 167 aaKnown RBP12.26□□□□□ -0.45
USP48-210ENST00000489108 CIB1Q99828 191 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 TAF9BQ9HBM6 251 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 ZNF355PQ9NSJ1 428 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 ETAA1Q9NY74 926 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 FAM53CQ9NYF3 392 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 TAS2R4Q9NYW5 299 aa12.26□□□□□ -0.45
USP48-210ENST00000489108 RYR1P21817 5038 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 C13orf42A0A1B0GVH6 325 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 MCRIP1C9JLW8 97 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 E9PI62 339 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 TPPPO94811 219 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 CNIH1O95406 144 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 TFAP2AP05549 437 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 SOX2P48431 317 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 FAM131AQ6UXB0 335 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 LHFPL3Q86UP9 236 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 DEFB125Q8N687 156 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 ACBD7Q8N6N7 88 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 RGP1Q92546 391 aaPredicted RBP12.25□□□□□ -0.45
USP48-210ENST00000489108 TMEM106AQ96A25 262 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 NEURL2Q9BR09 285 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 ISG20L2Q9H9L3 353 aaKnown RBP12.25□□□□□ -0.45
USP48-210ENST00000489108 ENOPH1Q9UHY7 261 aa12.25□□□□□ -0.45
USP48-210ENST00000489108 SAA2-SAA4A0A096LPE2 208 aa12.24□□□□□ -0.45
USP48-210ENST00000489108 TMEM212A6NML5 194 aa12.24□□□□□ -0.45
USP48-210ENST00000489108 FADS2O95864 444 aaKnown RBP12.24□□□□□ -0.45
USP48-210ENST00000489108 RPSAP08865 295 aaKnown RBP12.24□□□□□ -0.45
USP48-210ENST00000489108 SAA2P0DJI9 122 aaPredicted RBP12.24□□□□□ -0.45
USP48-210ENST00000489108 MECP2P51608 486 aaKnown RBP12.24□□□□□ -0.45
USP48-210ENST00000489108 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
USP48-210ENST00000489108 SLC22A6Q4U2R8 563 aa12.24□□□□□ -0.45
USP48-210ENST00000489108 TRAT1Q6PIZ9 186 aa12.24□□□□□ -0.45
USP48-210ENST00000489108 GAPTQ8N292 157 aa12.24□□□□□ -0.45
USP48-210ENST00000489108 OR5T1Q8NG75 326 aa12.24□□□□□ -0.45
USP48-210ENST00000489108 S100A13Q99584 98 aa12.24□□□□□ -0.45
USP48-210ENST00000489108 SIGLEC8Q9NYZ4 499 aa12.24□□□□□ -0.45
USP48-210ENST00000489108 KIAA1109Q2LD37 5005 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 CXorf65A6NEN9 183 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 CD7P09564 240 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 GTF2F2P13984 249 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 ZNF93P35789 620 aaPredicted RBP12.23□□□□□ -0.45
USP48-210ENST00000489108 DYRK1AQ13627 763 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 ZNF562Q6V9R5 426 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 ZDHHC13Q8IUH4 622 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 CYYR1Q96J86 154 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 JAM3Q9BX67 310 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 GABARAPL1Q9H0R8 117 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 WFDC10AQ9H1F0 79 aa12.23□□□□□ -0.45
USP48-210ENST00000489108 PAK1IP1Q9NWT1 392 aaPredicted RBP12.23□□□□□ -0.45
USP48-210ENST00000489108 RCC2Q9P258 522 aaKnown RBP12.23□□□□□ -0.45
USP48-210ENST00000489108 A0A0G2JLM5 398 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 YPEL1O60688 119 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 GSTP1P09211 210 aaKnown RBP12.22□□□□□ -0.45
USP48-210ENST00000489108 CT45A6P0DMU7 189 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 CT45A5P0DMU8 189 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 CT45A7P0DMV0 189 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 TATDN3Q17R31 274 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 MOGAT2Q3SYC2 334 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 DDI2Q5TDH0 399 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 RAB12Q6IQ22 244 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 GLDNQ6ZMI3 551 aaPredicted RBP12.22□□□□□ -0.45
USP48-210ENST00000489108 POC5Q8NA72 575 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 YPEL2Q96QA6 119 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 ALG8Q9BVK2 526 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 SRD5A3Q9H8P0 318 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 SPACA1Q9HBV2 294 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 TMEM138Q9NPI0 162 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 METTL1Q9UBP6 276 aaKnown RBP12.22□□□□□ -0.45
USP48-210ENST00000489108 JPT1Q9UK76 154 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 EXOGQ9Y2C4 368 aaKnown RBP12.22□□□□□ -0.45
USP48-210ENST00000489108 PEX16Q9Y5Y5 336 aa12.22□□□□□ -0.45
USP48-210ENST00000489108 ZNF785A8K8V0 405 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 OR11H12B2RN74 326 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 ZNF780AO75290 641 aaPredicted RBP12.21□□□□□ -0.45
USP48-210ENST00000489108 CA2P00918 260 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 TRBV12-3P01733 135 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 MAS1P04201 325 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 GNGT1P63211 74 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 ATP6AP1Q15904 470 aa12.21□□□□□ -0.45
USP48-210ENST00000489108 SYS1Q8N2H4 156 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms