RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 MSI2Q96DH6 328 aaKnown RBP11.27□□□□□ -0.6
CHD1L-208ENST00000488864 C14orf144Q96I85 54 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST1H2BNQ99877 126 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 HIST1H2BMQ99879 126 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 OPA3Q9H6K4 179 aa11.27□□□□□ -0.6
CHD1L-208ENST00000488864 USP9XQ93008 2570 aaPredicted RBP11.27□□□□□ -0.61
CHD1L-208ENST00000488864 IGHV1-18A0A0C4DH31 117 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 A0A1B0GV90 55 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 FAM221AA4D161 298 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 ST8SIA3O43173 380 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 ATP6V0CP27449 155 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 DUSP1P28562 367 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 UBE2KP61086 200 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 EWSR1Q01844 656 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHD1L-208ENST00000488864 IL13RA2Q14627 380 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 TAF9Q16594 264 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 WFDC8Q8IUA0 241 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 OR2G3Q8NGZ4 309 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 Q96M66 194 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 GPR61Q9BZJ8 451 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 PIGLQ9Y2B2 252 aa11.27□□□□□ -0.61
CHD1L-208ENST00000488864 CXorf65A6NEN9 183 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 DLK1P80370 383 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 ZNF92Q03936 586 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 WFIKKN1Q96NZ8 548 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 C1QTNF5Q9BXJ0 243 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 CDH20Q9HBT6 801 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 OBP2BQ9NPH6 170 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 SLC2A9Q9NRM0 540 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 V9GYS6 101 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 PLCE1Q9P212 2302 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 IGSF23A1L1A6 192 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 ERVS71-1P61550 626 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 LRTM2Q8N967 370 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 OR4D5Q8NGN0 318 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 GPR173Q9NS66 373 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 NECAP2Q9NVZ3 263 aa11.26□□□□□ -0.61
CHD1L-208ENST00000488864 SPRY1O43609 319 aaPredicted RBP11.25□□□□□ -0.61
CHD1L-208ENST00000488864 DHRS3O75911 302 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 IGLV1-44P01699 117 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 TRGC2P03986 189 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 OMGP23515 440 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 KHDC3LQ587J8 217 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 COLCA1Q6ZS62 124 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 ZNF429Q86V71 674 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 HIST3H2BBQ8N257 126 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 CCDC54Q8NEL0 328 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 LINC01560Q8TB33 94 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 ABCA4P78363 2273 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 A0A0U1RQV5 110 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 SEC14L6B5MCN3 397 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 CYB5BO43169 146 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 PHF1O43189 567 aaPredicted RBP11.25□□□□□ -0.61
CHD1L-208ENST00000488864 THBDP07204 575 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 HIST1H1BP16401 226 aaKnown RBP11.25□□□□□ -0.61
CHD1L-208ENST00000488864 GAMTQ14353 236 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 ICAM4Q14773 271 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 ARL6IP1Q15041 203 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 MEX3BQ6ZN04 569 aaKnown RBP11.25□□□□□ -0.61
CHD1L-208ENST00000488864 FBXL14Q8N1E6 418 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 SLC35G3Q8N808 338 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 CYB561D1Q8N8Q1 229 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 TP53RKQ96S44 253 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 SUCNR1Q9BXA5 334 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 C11orf1Q9H5F2 150 aa11.25□□□□□ -0.61
CHD1L-208ENST00000488864 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 SLC22A25Q6T423 547 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 LGI3Q8N145 548 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 OR2C3Q8N628 320 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 TMEM171Q8WVE6 324 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 ITLN2Q8WWU7 325 aaPredicted RBP11.24□□□□□ -0.61
CHD1L-208ENST00000488864 RNASE6Q93091 150 aaKnown RBP11.24□□□□□ -0.61
CHD1L-208ENST00000488864 APOBEC3DQ96AK3 386 aaPredicted RBP11.24□□□□□ -0.61
CHD1L-208ENST00000488864 MEGF10Q96KG7 1140 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 SMDT1Q9H4I9 107 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 TMED3Q9Y3Q3 217 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 A0A087WWC5 75 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 SMPD2O60906 423 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 SP5Q6BEB4 398 aaPredicted RBP11.24□□□□□ -0.61
CHD1L-208ENST00000488864 DMRTC2Q8IXT2 367 aaPredicted RBP11.24□□□□□ -0.61
CHD1L-208ENST00000488864 ABHD5Q8WTS1 349 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 GTF3AQ92664 365 aaKnown RBP11.24□□□□□ -0.61
CHD1L-208ENST00000488864 PRO1933Q9H354 126 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 GFOD1Q9NXC2 390 aa11.24□□□□□ -0.61
CHD1L-208ENST00000488864 IGKV1-27A0A075B6S5 117 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 SCAF4O95104 1147 aaKnown RBP11.23□□□□□ -0.61
CHD1L-208ENST00000488864 SELLP14151 372 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 EPHA1P21709 976 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 MTCP1P56278 107 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 GNMTQ14749 295 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 RSU1Q15404 277 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 Q6ZPA2 131 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 PP6455Q8WZ26 134 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 OR2J1Q9GZK6 312 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 MAGT1Q9H0U3 335 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 UFSP2Q9NUQ7 469 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 FZR1Q9UM11 496 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 FAM230AA0A1W2PPH8 454 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 TRGC1P0CF51 173 aa11.23□□□□□ -0.61
CHD1L-208ENST00000488864 RBP2P50120 134 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms