RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SDHAF2Q9NX18 166 aa16.07■□□□□ 0.16
CCM2-216ENST00000488727 RCC2Q9P258 522 aaKnown RBP16.07■□□□□ 0.16
CCM2-216ENST00000488727 PFDN2Q9UHV9 154 aa16.07■□□□□ 0.16
CCM2-216ENST00000488727 IGKV1D-17A0A075B6S4 117 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 A0A1B0GW55 424 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 H0YIZ8 118 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 KNG1P01042 644 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 DUX4L2P0CJ85 424 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 DUX4L3P0CJ86 424 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 DUX4L4P0CJ87 422 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 DUX4L5P0CJ88 424 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 DUX4L6P0CJ89 424 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 DUX4L7P0CJ90 424 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 PSG2P11465 335 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 DUX4L9Q6RFH8 374 aaPredicted RBP16.06■□□□□ 0.16
CCM2-216ENST00000488727 LINC00596Q86U02 117 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 Q8IYB0 196 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 OR1S1Q8NH92 325 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 STOML3Q8TAV4 291 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 DCUN1D4Q92564 292 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 ZNF665Q9H7R5 613 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 METTL8Q9H825 291 aaKnown RBP16.06■□□□□ 0.16
CCM2-216ENST00000488727 PATZ1Q9HBE1 687 aaKnown RBP16.06■□□□□ 0.16
CCM2-216ENST00000488727 PRR13Q9NZ81 148 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 CTSZQ9UBR2 303 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 DUX4Q9UBX2 424 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 HIVEP1P15822 2718 aa16.06■□□□□ 0.16
CCM2-216ENST00000488727 F5H0A9 414 aaPredicted RBP16.05■□□□□ 0.16
CCM2-216ENST00000488727 OR7C1O76099 320 aaPredicted RBP16.05■□□□□ 0.16
CCM2-216ENST00000488727 PET100P0DJ07 73 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 ZNF728P0DKX0 622 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 LUMP51884 338 aaPredicted RBP16.05■□□□□ 0.16
CCM2-216ENST00000488727 Q6ZPA2 131 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 FAM58AQ8N1B3 248 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 MOB3AQ96BX8 217 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 GALNT14Q96FL9 552 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 OR10C1Q96KK4 312 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 ZNF471Q9BX82 626 aaPredicted RBP16.05■□□□□ 0.16
CCM2-216ENST00000488727 PCDHB10Q9UN67 800 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 WNT2P09544 360 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 GLP1RP43220 463 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 CEBPDP49716 269 aaPredicted RBP16.05■□□□□ 0.16
CCM2-216ENST00000488727 RBM39Q14498 530 aaKnown RBP16.05■□□□□ 0.16
CCM2-216ENST00000488727 BRICD5Q6PL45 260 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 HSD17B13Q7Z5P4 300 aaPredicted RBP16.05■□□□□ 0.16
CCM2-216ENST00000488727 EIF4E3Q8N5X7 224 aaKnown RBP16.05■□□□□ 0.16
CCM2-216ENST00000488727 CCL13Q99616 98 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 TMUB1Q9BVT8 246 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 NAA60Q9H7X0 242 aa16.05■□□□□ 0.16
CCM2-216ENST00000488727 DOCK11Q5JSL3 2073 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 MPTX1A8MV57 137 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 FAM157AC9JC47 383 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 FCN3O75636 299 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 PRKACAP17612 351 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 TMEM249Q2WGJ8 235 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 CD177Q8N6Q3 437 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 FAM216BQ8N7L0 139 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 MIOXQ9UGB7 285 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 SESN1Q9Y6P5 492 aa16.04■□□□□ 0.16
CCM2-216ENST00000488727 POM121CA8CG34 1229 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 TMPRSS2O15393 492 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 ADAM20O43506 726 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 NDUFA2O43678 99 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 NAPSAO96009 420 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 FCGR2CP31995 323 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 ZNF788Q6ZQV5 615 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 SLC38A6Q8IZM9 456 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 LRTM2Q8N967 370 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 LRRC20Q8TCA0 184 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 RAB39BQ96DA2 213 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 C18orf12Q96KH6 178 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 GAFA1Q96PS6 74 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 AQP10Q96PS8 301 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 RHOFQ9HBH0 211 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 KAAG1Q9UBP8 84 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 OR14J1Q9UGF5 321 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 METRNQ9UJH8 293 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 ARHGAP32A7KAX9 2087 aa16.03■□□□□ 0.16
CCM2-216ENST00000488727 FGF2P09038 288 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 HOXB5P09067 269 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 SELLP14151 372 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 ZP3P21754 424 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 DUSP1P28562 367 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 PIGPP57054 158 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 IL13RA2Q14627 380 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 PDCD1Q15116 288 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 ZNF841Q6ZN19 808 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 NEIL1Q96FI4 390 aaPredicted RBP16.02■□□□□ 0.16
CCM2-216ENST00000488727 RSRP1Q9BUV0 290 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 SUCNR1Q9BXA5 334 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 KCNIP3Q9Y2W7 256 aa16.02■□□□□ 0.16
CCM2-216ENST00000488727 MALRD1Q5VYJ5 2156 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 A8MXK9 166 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 CD99P14209 185 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 PRDX2P32119 198 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 NUP62P37198 522 aaPredicted RBP16.02■□□□□ 0.15
CCM2-216ENST00000488727 GABRA2P47869 451 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 RAB32Q13637 225 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 TMEM187Q14656 261 aa16.02■□□□□ 0.15
CCM2-216ENST00000488727 ZNF146Q15072 292 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms