RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 CYB5R3P00387 301 aaPredicted RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 IGKV1-5P01602 117 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 C1QTNF9P0C862 333 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 DUX4L2P0CJ85 424 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 DUX4L3P0CJ86 424 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 DUX4L4P0CJ87 422 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 DUX4L5P0CJ88 424 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 DUX4L6P0CJ89 424 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 DUX4L7P0CJ90 424 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 SFTPCP11686 197 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 MUC1P15941 1255 aaPredicted RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 PVALBP20472 110 aaPredicted RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 CHRNB4P30926 498 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 SSTR5P35346 364 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 LPAR6P43657 344 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 PAX9P55771 341 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 LOXL3P58215 753 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 BRWD1-AS2P59051 145 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 POLR2GP62487 172 aaKnown RBP eCLIP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 RPL30P62888 115 aaKnown RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 NHLH2Q02577 135 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 EDDM3AQ14507 147 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 SWI5Q1ZZU3 235 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 MORN2Q502X0 79 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 FAM209AQ5JX71 171 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 THOC7Q6I9Y2 204 aaKnown RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 HSD17B13Q7Z5P4 300 aaPredicted RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 DMRTC2Q8IXT2 367 aaPredicted RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 FGFRL1Q8N441 504 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 TCTEX1D1Q8N7M0 179 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 UBAC2Q8NBM4 344 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 GALNT11Q8NCW6 608 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 RNF141Q8WVD5 230 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 CORO2AQ92828 525 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 NINJ1Q92982 152 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 RNASE6Q93091 150 aaKnown RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 C14orf79Q96F83 325 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 C5orf30Q96GV9 206 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 GAFA1Q96PS6 74 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 YPEL2Q96QA6 119 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 EGLN1Q9GZT9 426 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 MAGT1Q9H0U3 335 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 ZNF665Q9H7R5 613 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 LINC00574Q9H8X3 128 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 LIN7CQ9NUP9 197 aaKnown RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 PLA2G2EQ9NZK7 142 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 OR6C3Q9NZP0 311 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 DUX4Q9UBX2 424 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 FBXL17Q9UF56 701 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 PFDN2Q9UHV9 154 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 KCNS2Q9ULS6 477 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 GAB2Q9UQC2 676 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 RNF115Q9Y4L5 304 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 PTPRZ1P23471 2315 aaPredicted RBP5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 GTF3C1Q12789 2109 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 DMXL1Q9Y485 3027 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 ZFHX4Q86UP3 3567 aa5.6□□□□□ -1.51
RN7SL561P-201ENST00000488553 KMT2BQ9UMN6 2715 aaPredicted RBP5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 IGHV3-43A0A0B4J1X8 118 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 FAM24AA6NFZ4 105 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 LRRC30A6NM36 301 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 DEFB108AA8MXU0 73 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 TMEM178BH3BS89 294 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 I3L521 148 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 LGALS8O00214 317 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 SHOXO15266 292 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 SIGLEC5O15389 551 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 PROP1O75360 226 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 CLDN1O95832 211 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 P0C879 139 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 IGHV3-43DP0DP04 118 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 IRF2P14316 349 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 ZNF16P17020 682 aaPredicted RBP5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 APOBEC3AP31941 199 aaPredicted RBP5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 ID4P47928 161 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 CCL8P80075 99 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 ADORA2A-AS1P86434 159 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 EWSR1Q01844 656 aaKnown RBP eCLIP5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 EFNB3Q15768 340 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 C17orf58Q2M2W7 97 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 EIF5AL1Q6IS14 154 aaKnown RBP5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 ADAM5Q6NVV9 412 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 CLEC9AQ6UXN8 241 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 ZNF66Q6ZN08 573 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 TGIF2LYQ8IUE0 185 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 ODF3L1Q8IXM7 274 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 ZCCHC24Q8N2G6 241 aaKnown RBP5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 OR2C3Q8N628 320 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 TMEM252Q8N6L7 170 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 DEFB108BQ8NET1 73 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 LINC01560Q8TB33 94 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 TMED6Q8WW62 240 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 MARC2Q969Z3 335 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 SAT2Q96F10 170 aaPredicted RBP5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 PLPPR2Q96GM1 343 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 CCL13Q99616 98 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 GINS3Q9BRX5 216 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 SLC25A31Q9H0C2 315 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 OR2D2Q9H210 308 aa5.59□□□□□ -1.51
RN7SL561P-201ENST00000488553 LYRM2Q9NU23 88 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms