RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ZNF818PQ6ZRF7 136 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 ZIC4Q8N9L1 334 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 OR2Y1Q8NGV0 311 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 IL22RA2Q969J5 263 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 C20orf144Q9BQM9 153 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 TNFSF12O43508 249 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 TCN2P20062 427 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 TMEM267Q0VDI3 215 aaPredicted RBP12.13□□□□□ -0.47
RER1-207ENST00000488353 PRSS8Q16651 343 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 Q6ZPA2 131 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 GAPTQ8N292 157 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 ZCCHC14Q8WYQ9 949 aaKnown RBP12.13□□□□□ -0.47
RER1-207ENST00000488353 LHX4Q969G2 390 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 BORCS8Q96FH0 119 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 WFIKKN1Q96NZ8 548 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 DIRC2Q96SL1 478 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 SRXN1Q9BYN0 137 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
RER1-207ENST00000488353 LCATP04180 440 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 LIFP15018 202 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
RER1-207ENST00000488353 OR5D13Q8NGL4 314 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 PARLQ9H300 379 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 ZNF442Q9H7R0 627 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 ASCL3Q9NQ33 180 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 TNFSF13O75888 250 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 CNOT4O95628 575 aaKnown RBP12.12□□□□□ -0.47
RER1-207ENST00000488353 FKBP2P26885 142 aaKnown RBP12.12□□□□□ -0.47
RER1-207ENST00000488353 MPLP40238 635 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 WNT5AP41221 380 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 FOLR3P41439 243 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 PSMB3P49720 205 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 RNPS1Q15287 305 aaKnown RBP12.12□□□□□ -0.47
RER1-207ENST00000488353 LHFPL2Q6ZUX7 228 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 BTF3L4Q96K17 158 aa12.12□□□□□ -0.47
RER1-207ENST00000488353 IFNL4K9M1U5 179 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 OTX2P32243 289 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 NTF4P34130 210 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 DSCR4P56555 118 aaPredicted RBP12.11□□□□□ -0.47
RER1-207ENST00000488353 RANP62826 216 aaKnown RBP12.11□□□□□ -0.47
RER1-207ENST00000488353 LRRC75BQ2VPJ9 315 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 FAM180AQ6UWF9 173 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 MRPL30Q8TCC3 161 aaKnown RBP12.11□□□□□ -0.47
RER1-207ENST00000488353 PLK3Q9H4B4 646 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 PARD6AQ9NPB6 346 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 NCKAP5O14513 1909 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 TTC28Q96AY4 2481 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 PIGBOS1A0A0B4J2F0 54 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 IGKV1-12A0A0C4DH73 117 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 LNP1A1A4G5 178 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 IGKV1D-12P01611 117 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 CYC1P08574 325 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 EDN3P14138 238 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 SSR4P51571 173 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 YRDCQ86U90 279 aaKnown RBP12.11□□□□□ -0.47
RER1-207ENST00000488353 RPS19BP1Q86WX3 136 aaKnown RBP12.11□□□□□ -0.47
RER1-207ENST00000488353 ZNF525Q8N782 197 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 SDSLQ96GA7 329 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 GPHA2Q96T91 129 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 REPIN1Q9BWE0 567 aaKnown RBP12.11□□□□□ -0.47
RER1-207ENST00000488353 TRAPPC1Q9Y5R8 145 aa12.11□□□□□ -0.47
RER1-207ENST00000488353 H0Y980 276 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 ZNHIT1O43257 154 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 VAMP5O95183 116 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 SLC25A6P12236 298 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 B4GALT1P15291 398 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 CD82P27701 267 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 TNFSF10P50591 281 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 HBG1P69891 147 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 HBG2P69892 147 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 OR5I1Q13606 314 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 FAM27BQ5VT28 67 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 TMEM256Q8N2U0 113 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 ALKBH3Q96Q83 286 aaPredicted RBP12.1□□□□□ -0.47
RER1-207ENST00000488353 OR2J1Q9GZK6 312 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 GPR35Q9HC97 309 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 TMEM106BQ9NUM4 274 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 IL36GQ9NZH8 169 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 LOXL2Q9Y4K0 774 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 VENTXO95231 258 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 IL6RP08887 468 aaPredicted RBP12.1□□□□□ -0.47
RER1-207ENST00000488353 GNG10P50151 68 aa12.1□□□□□ -0.47
RER1-207ENST00000488353 UBE2NP61088 152 aaKnown RBP12.1□□□□□ -0.47
RER1-207ENST00000488353 KNTC1P50748 2209 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 SLC22A20A6NK97 555 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 SIAH2O43255 324 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 LILRA1O75019 489 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 GYPAP02724 150 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 SELEP16581 610 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 ZNF32P17041 273 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 CRYGSP22914 178 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 ACP1P24666 158 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 RPL15P61313 204 aaKnown RBP12.09□□□□□ -0.47
RER1-207ENST00000488353 TESK1Q15569 626 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 DCAF12Q5T6F0 453 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 CST9LP1Q5W188 147 aa12.09□□□□□ -0.47
RER1-207ENST00000488353 TOMM20LQ6UXN7 152 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms