RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 KIR2DS1Q14954 304 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 MED22Q15528 200 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 MMDQ15546 238 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 HSD17B12Q53GQ0 312 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 LY6G6FQ5SQ64 297 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 LCNL1Q6ZST4 164 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 OR8U1Q8NH10 309 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 TMEM59Q9BXS4 323 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 ABRACLQ9P1F3 81 aa17.72■□□□□ 0.43
PTPN4-211ENST00000488279 ZNF107Q9UII5 783 aaPredicted RBP17.72■□□□□ 0.43
PTPN4-211ENST00000488279 COL7A1Q02388 2944 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 IGHG4P01861 327 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 OR5H8P0DN80 308 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 HTR2CP28335 458 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 CFHR3Q02985 330 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 C6orf201Q7Z4U5 140 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 ODF3L1Q8IXM7 274 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 OR2AK2Q8NG84 335 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 KCTD7Q96MP8 289 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 CHCHD6Q9BRQ6 235 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 ZNF580Q9UK33 172 aa17.71■□□□□ 0.43
PTPN4-211ENST00000488279 SLC2A2P11168 524 aaPredicted RBP17.7■□□□□ 0.42
PTPN4-211ENST00000488279 MYF6P23409 242 aa17.7■□□□□ 0.42
PTPN4-211ENST00000488279 ACTBP60709 375 aa17.7■□□□□ 0.42
PTPN4-211ENST00000488279 NABP2Q9BQ15 211 aa17.7■□□□□ 0.42
PTPN4-211ENST00000488279 ZNF251Q9BRH9 671 aa17.7■□□□□ 0.42
PTPN4-211ENST00000488279 STEAP1Q9UHE8 339 aa17.7■□□□□ 0.42
PTPN4-211ENST00000488279 LSM2Q9Y333 95 aaKnown RBP17.7■□□□□ 0.42
PTPN4-211ENST00000488279 SLC22A1O15245 554 aa17.69■□□□□ 0.42
PTPN4-211ENST00000488279 HMGN3Q15651 99 aa17.69■□□□□ 0.42
PTPN4-211ENST00000488279 DEFB136Q30KP8 78 aa17.69■□□□□ 0.42
PTPN4-211ENST00000488279 ZNF833PQ6ZTB9 187 aa17.69■□□□□ 0.42
PTPN4-211ENST00000488279 IL1F10Q8WWZ1 152 aa17.69■□□□□ 0.42
PTPN4-211ENST00000488279 RITA1Q96K30 269 aa17.69■□□□□ 0.42
PTPN4-211ENST00000488279 TM2D1Q9BX74 207 aa17.69■□□□□ 0.42
PTPN4-211ENST00000488279 MRPL20Q9BYC9 149 aaKnown RBP17.69■□□□□ 0.42
PTPN4-211ENST00000488279 CHMP1AQ9HD42 196 aaPredicted RBP17.69■□□□□ 0.42
PTPN4-211ENST00000488279 PLEKHJ1Q9NW61 149 aa17.69■□□□□ 0.42
PTPN4-211ENST00000488279 ANKRD65E5RJM6 399 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 UCHL1P09936 223 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 CD37P11049 281 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 PSMB8P28062 276 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 BLVRBP30043 206 aaPredicted RBP17.68■□□□□ 0.42
PTPN4-211ENST00000488279 OR3A3P47888 321 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 DGCR2P98153 550 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 UNC119Q13432 240 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 VAX1Q5SQQ9 334 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 LIPKQ5VXJ0 399 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 OR5M8Q8NGP6 311 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 UFD1Q92890 307 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 TMEM203Q969S6 136 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 NICN1Q9BSH3 213 aa17.68■□□□□ 0.42
PTPN4-211ENST00000488279 SAA2-SAA4A0A096LPE2 208 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 TMEM14DPA8MWL7 114 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 BPNT1O95861 308 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 NAPSAO96009 420 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 SAA2P0DJI9 122 aaPredicted RBP17.67■□□□□ 0.42
PTPN4-211ENST00000488279 QRFPP83859 136 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 DCTN2Q13561 401 aaKnown RBP17.67■□□□□ 0.42
PTPN4-211ENST00000488279 TMEM65Q6PI78 240 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 SVOPQ8N4V2 548 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 OR6M1Q8NGM8 313 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 SETD6Q8TBK2 473 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 C4orf3Q8WVX3 66 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 RIMS4Q9H426 269 aaPredicted RBP17.67■□□□□ 0.42
PTPN4-211ENST00000488279 PIPOXQ9P0Z9 390 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 TPRKBQ9Y3C4 175 aa17.67■□□□□ 0.42
PTPN4-211ENST00000488279 NBR2O15453 112 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 RAMP3O60896 148 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 HLA-DRB1P01911 266 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 CD69Q07108 199 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 IRF3Q14653 427 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 LIN54Q6MZP7 749 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 ZNF880Q6PDB4 577 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 URM1Q9BTM9 101 aaKnown RBP17.66■□□□□ 0.42
PTPN4-211ENST00000488279 ANKRD60Q9BZ19 345 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 OR51J1Q9H342 316 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 KCNK15Q9H427 330 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 KIAA1456Q9P272 454 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 NKX1-2Q9UD57 310 aaPredicted RBP17.66■□□□□ 0.42
PTPN4-211ENST00000488279 WSB1Q9Y6I7 421 aa17.66■□□□□ 0.42
PTPN4-211ENST00000488279 RAB29O14966 203 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 HSMCR30P0CW71 290 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 ARSBP15848 533 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 CNTFRP26992 372 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 C5orf64Q2M2E5 130 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 FAM71F2Q6NXP2 309 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 MOB1BQ7L9L4 216 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 NPBQ8NG41 125 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 IFI27L2Q9H2X8 130 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 PLGRKTQ9HBL7 147 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 SLC23A1Q9UHI7 598 aa17.65■□□□□ 0.42
PTPN4-211ENST00000488279 A0A0A6YYD4 124 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 ST8SIA5O15466 376 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 PPIFP30405 207 aaKnown RBP17.64■□□□□ 0.41
PTPN4-211ENST00000488279 AQP4P55087 323 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 TPBGQ13641 420 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 TRAM1Q15629 374 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 C9orf66Q5T8R8 295 aa17.64■□□□□ 0.41
PTPN4-211ENST00000488279 UBE2E2Q96LR5 201 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms