RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 POM121Q96HA1 1249 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 C18orf12Q96KH6 178 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 SNX22Q96L94 193 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 NAA60Q9H7X0 242 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 MOB1AQ9H8S9 216 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 AK3Q9UIJ7 227 aa11.66□□□□□ -0.54
COPS7B-221ENST00000488111 TRBV24-1A0A075B6N3 115 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 A8MXE2 369 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 ST8SIA3O43173 380 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 DUSP1P28562 367 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 OTX1P32242 354 aaPredicted RBP11.65□□□□□ -0.54
COPS7B-221ENST00000488111 ARR3P36575 388 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 FAM27E3Q08E93 113 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 PPA1Q15181 289 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 SNAI3Q3KNW1 292 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 LYZL2Q7Z4W2 148 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 COMMD2Q86X83 199 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 PGAM5Q96HS1 289 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 BOD1Q96IK1 185 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 HIPK2Q9H2X6 1198 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 C11orf1Q9H5F2 150 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 OR14J1Q9UGF5 321 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 RFNGQ9Y644 331 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 NBASA2RRP1 2371 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 C5orf49A4QMS7 147 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 DHRS7CA6NNS2 312 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 CELA3BP08861 270 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 BLVRBP30043 206 aaPredicted RBP11.65□□□□□ -0.54
COPS7B-221ENST00000488111 PIGPP57054 158 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 HNF4GQ14541 408 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF266Q14584 549 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 P2RY6Q15077 328 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 C4orf17Q53FE4 359 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 BHLHA15Q7RTS1 189 aaPredicted RBP11.65□□□□□ -0.54
COPS7B-221ENST00000488111 MYPOPQ86VE0 399 aaPredicted RBP11.65□□□□□ -0.54
COPS7B-221ENST00000488111 WDR31Q8NA23 367 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 OR52M1Q8NGK5 317 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 CLDND2Q8NHS1 167 aa11.65□□□□□ -0.54
COPS7B-221ENST00000488111 NANOS1Q8WY41 292 aaKnown RBP11.65□□□□□ -0.54
COPS7B-221ENST00000488111 FAM230AA0A1W2PPH8 454 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 MSTNO14793 375 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 PITX3O75364 302 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 LCATP04180 440 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 OR5AC1P0C628 307 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 FUT3P21217 361 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 PRSS12P56730 875 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 PLP2Q04941 152 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 IGFBP7Q16270 282 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 FBXW12Q6X9E4 464 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 FBXL14Q8N1E6 418 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 POLEQ07864 2286 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 CLDN34H7C241 214 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 GCGP01275 180 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 HOXC12P31275 282 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 APLNRP35414 380 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 ALDH3B1P43353 468 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 IDH3GP51553 393 aaPredicted RBP11.64□□□□□ -0.55
COPS7B-221ENST00000488111 ARL6IP1Q15041 203 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 SP6Q3SY56 376 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 COA6Q5JTJ3 125 aaKnown RBP11.64□□□□□ -0.55
COPS7B-221ENST00000488111 TMEM211Q6ICI0 200 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 LIAT1Q6ZQX7 453 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 OR4D5Q8NGN0 318 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 OR2AE1Q8NHA4 323 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 R3HDM4Q96D70 268 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 RBMXL1Q96E39 390 aaKnown RBP11.64□□□□□ -0.55
COPS7B-221ENST00000488111 FAM71F1Q96KD3 344 aaPredicted RBP11.64□□□□□ -0.55
COPS7B-221ENST00000488111 GPER1Q99527 375 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 ATG101Q9BSB4 218 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 TM2D1Q9BX74 207 aa11.64□□□□□ -0.55
COPS7B-221ENST00000488111 ZNF701Q9NV72 531 aaPredicted RBP11.64□□□□□ -0.55
COPS7B-221ENST00000488111 IGKV1-9A0A0C4DH69 117 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 A0A1B0GU03 582 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 GEMIN2O14893 280 aaKnown RBP11.63□□□□□ -0.55
COPS7B-221ENST00000488111 CYB5R3P00387 301 aaPredicted RBP11.63□□□□□ -0.55
COPS7B-221ENST00000488111 PRB1P04280 392 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 GABRR1P24046 479 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 CD200P41217 278 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 PNRC1Q12796 327 aaPredicted RBP11.63□□□□□ -0.55
COPS7B-221ENST00000488111 KRTAP27-1Q3LI81 207 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 CYB5R2Q6BCY4 276 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 CRIP3Q6Q6R5 217 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 BBC3Q96PG8 261 aaPredicted RBP11.63□□□□□ -0.55
COPS7B-221ENST00000488111 SNHG12Q9BXW3 62 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 OR51B6Q9H340 312 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 LIME1Q9H400 295 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 MYO7BQ6PIF6 2116 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 MARCH11A6NNE9 402 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 ATXN7O15265 892 aaPredicted RBP11.63□□□□□ -0.55
COPS7B-221ENST00000488111 CCL1P22362 96 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 G0S2P27469 103 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 ASCL1P50553 236 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 OR2C3Q8N628 320 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 C1orf162Q8NEQ5 155 aaPredicted RBP11.63□□□□□ -0.55
COPS7B-221ENST00000488111 OR1P1Q8NH06 330 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 OR4X1Q8NH49 305 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 PRR7Q8TB68 274 aa11.63□□□□□ -0.55
COPS7B-221ENST00000488111 MSI2Q96DH6 328 aaKnown RBP11.63□□□□□ -0.55
COPS7B-221ENST00000488111 POM121L2Q96KW2 1035 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms