RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 OR8U8P0C7N1 319 aa22.02■■□□□ 1.12
HLA-C-208ENST00000487245 ACSF3Q4G176 576 aaPredicted RBP22.02■■□□□ 1.12
HLA-C-208ENST00000487245 KRBOX4Q5JUW0 171 aa22.02■■□□□ 1.12
HLA-C-208ENST00000487245 Q6ZRM9 215 aa22.02■■□□□ 1.12
HLA-C-208ENST00000487245 C1orf174Q8IYL3 243 aa22.02■■□□□ 1.12
HLA-C-208ENST00000487245 CLDND2Q8NHS1 167 aa22.02■■□□□ 1.12
HLA-C-208ENST00000487245 CXXC4Q9H2H0 198 aa22.02■■□□□ 1.12
HLA-C-208ENST00000487245 HES4Q9HCC6 221 aa22.02■■□□□ 1.12
HLA-C-208ENST00000487245 SYNGR2O43760 224 aa22.01■■□□□ 1.11
HLA-C-208ENST00000487245 S100A8P05109 93 aa22.01■■□□□ 1.11
HLA-C-208ENST00000487245 GRPP07492 148 aa22.01■■□□□ 1.11
HLA-C-208ENST00000487245 RPS23P62266 143 aaKnown RBP22.01■■□□□ 1.11
HLA-C-208ENST00000487245 DEFB109BQ30KR1 87 aa22.01■■□□□ 1.11
HLA-C-208ENST00000487245 KHDC3LQ587J8 217 aa22.01■■□□□ 1.11
HLA-C-208ENST00000487245 VWA1Q6PCB0 445 aa22.01■■□□□ 1.11
HLA-C-208ENST00000487245 METTL1Q9UBP6 276 aaKnown RBP22.01■■□□□ 1.11
HLA-C-208ENST00000487245 EIF3GO75821 320 aaKnown RBP eCLIP22■■□□□ 1.11
HLA-C-208ENST00000487245 NXPH3O95157 252 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 MPV17P39210 176 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 PSMG3Q9BT73 122 aaPredicted RBP22■■□□□ 1.11
HLA-C-208ENST00000487245 PARD6GQ9BYG4 376 aaPredicted RBP22■■□□□ 1.11
HLA-C-208ENST00000487245 BCL2L14Q9BZR8 327 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 CACNG5Q9UF02 275 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 PUS1Q9Y606 427 aaKnown RBP eCLIP22■■□□□ 1.11
HLA-C-208ENST00000487245 A0A1W2PPE2 198 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 PCP4L1A6NKN8 68 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 HAND1O96004 215 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 IGKV1-5P01602 117 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 S100A6P06703 90 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 ZNF585BQ52M93 769 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 RNASE11Q8TAA1 199 aaKnown RBP22■■□□□ 1.11
HLA-C-208ENST00000487245 RNF150Q9ULK6 438 aa22■■□□□ 1.11
HLA-C-208ENST00000487245 C3orf80F5H4A9 247 aa21.99■■□□□ 1.11
HLA-C-208ENST00000487245 H3BQ15 152 aa21.99■■□□□ 1.11
HLA-C-208ENST00000487245 KITLGP21583 273 aa21.99■■□□□ 1.11
HLA-C-208ENST00000487245 ZADH2Q8N4Q0 377 aa21.99■■□□□ 1.11
HLA-C-208ENST00000487245 FAM24BQ8N5W8 94 aa21.99■■□□□ 1.11
HLA-C-208ENST00000487245 KCNIP1Q9NZI2 227 aa21.99■■□□□ 1.11
HLA-C-208ENST00000487245 RNF212BA8MTL3 300 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 FAM90A26D6RGX4 464 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 H0YL77 283 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 WDR1O75083 606 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 AGFG2O95081 481 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 OR2C1O95371 312 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 ARG1P05089 322 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 TINAGQ9UJW2 476 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 RBM7Q9Y580 266 aaKnown RBP21.98■■□□□ 1.11
HLA-C-208ENST00000487245 WDFY4Q6ZS81 3184 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 TMEM30CPA0ZSE6 113 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 WISP2O76076 250 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 IGHV2-5P01817 119 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 P2RY6Q15077 328 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 HAGHQ16775 308 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 ZNF718Q3SXZ3 478 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 THNSL2Q86YJ6 484 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 MUCL1Q96DR8 90 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 PROCRQ9UNN8 238 aa21.98■■□□□ 1.11
HLA-C-208ENST00000487245 LOC102723971A0A1B0GUV8 181 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 hCG_1809904A0A1W2PP81 198 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 A0A1W2PR64 198 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 A0A1W2PRV1 198 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 PPIHO43447 177 aaKnown RBP21.97■■□□□ 1.11
HLA-C-208ENST00000487245 SMIM6P0DI80 62 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 EIF2S3P41091 472 aaKnown RBP21.97■■□□□ 1.11
HLA-C-208ENST00000487245 TMEM267Q0VDI3 215 aaPredicted RBP21.97■■□□□ 1.11
HLA-C-208ENST00000487245 ZNF525Q8N782 197 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 FAM169BQ8N8A8 192 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 ZBTB34Q8NCN2 500 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 MBD3L1Q8WWY6 194 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 PSENENQ9NZ42 101 aa21.97■■□□□ 1.11
HLA-C-208ENST00000487245 IGLV1-44P01699 117 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 CTAG1AP78358 180 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 SLC35E4Q6ICL7 350 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 HEPN1Q6WQI6 88 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 PRR7Q8TB68 274 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 SCGB1C1Q8TD33 95 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 RAB39BQ96DA2 213 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 PPP1R3CQ9UQK1 317 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 C1QTNF9BB2RNN3 333 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 MLNRO43193 412 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 TIMM8AO60220 97 aaPredicted RBP21.96■■□□□ 1.11
HLA-C-208ENST00000487245 CECR9P0C854 216 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 MZT1Q08AG7 82 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 SLC35E3Q7Z769 313 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 ZNF429Q86V71 674 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 C11orf53Q8IXP5 236 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 TOLLIPQ9H0E2 274 aa21.96■■□□□ 1.11
HLA-C-208ENST00000487245 FREM2Q5SZK8 3169 aa21.95■■□□□ 1.11
HLA-C-208ENST00000487245 FAM186AA6NE01 2351 aa21.95■■□□□ 1.11
HLA-C-208ENST00000487245 TRAV39A0A0B4J263 110 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 H3BP45 60 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 GCH1P30793 250 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 CEACAM6P40199 344 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 HBG1P69891 147 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 HBG2P69892 147 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 SLC25A24Q6NUK1 477 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 CXorf67Q86X51 503 aaPredicted RBP21.95■■□□□ 1.1
HLA-C-208ENST00000487245 DRAM1Q8N682 238 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 TVP23CQ96ET8 276 aa21.95■■□□□ 1.1
HLA-C-208ENST00000487245 SEBOXQ9HB31 216 aaPredicted RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms