RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 C9orf62Q8N4C0 152 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 BVESQ8NE79 360 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 OR52L2PQ8NGH6 319 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 OR8U1Q8NH10 309 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 UBALD1Q8TB05 177 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 THAP6Q8TBB0 222 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 CORO2AQ92828 525 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 IL22RA2Q969J5 263 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 SEC22AQ96IW7 307 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 YPEL2Q96QA6 119 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 TMEM222Q9H0R3 208 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 SLA2Q9H6Q3 261 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 OR2S2Q9NQN1 319 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 ZFP57Q9NU63 452 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 TAS2R3Q9NYW6 316 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 CALYQ9NYX4 217 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 GNG12Q9UBI6 72 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 KAAG1Q9UBP8 84 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 SLC25A10Q9UBX3 287 aaPredicted RBP5.86□□□□□ -1.47
SF3A3-206ENST00000487062 TMED3Q9Y3Q3 217 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 HSPB11Q9Y547 144 aa5.86□□□□□ -1.47
SF3A3-206ENST00000487062 SPENQ96T58 3664 aaKnown RBP5.86□□□□□ -1.47
SF3A3-206ENST00000487062 FXYD6-FXYD2A0A087WZ82 144 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 KBTBD11-OT1A0A1B0GTJ5 212 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 A6NNC1 897 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 L7N2F9 121 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 F2RL2O00254 374 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 ITGB1BP1O14713 200 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 SHOXO15266 292 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 PGLYRP1O75594 196 aaPredicted RBP5.85□□□□□ -1.47
SF3A3-206ENST00000487062 RLN2P04090 185 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 DANCRP0C864 163 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 PET100P0DJ07 73 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 SLC25A4P12235 298 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 SELLP14151 372 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 IGFBP2P18065 325 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 F2RP25116 425 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 UCP1P25874 307 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 PSMB6P28072 239 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 SSTR5P35346 364 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 NUP62P37198 522 aaPredicted RBP5.85□□□□□ -1.47
SF3A3-206ENST00000487062 MRPS11P82912 194 aaKnown RBP5.85□□□□□ -1.47
SF3A3-206ENST00000487062 CATR1Q13166 79 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 SMCO1Q147U7 214 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 SP6Q3SY56 376 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 ESCO2Q56NI9 601 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 GGNBP1Q5YKI7 109 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 C11orf71Q6IPW1 123 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 C11orf87Q6NUJ2 197 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 TMEM65Q6PI78 240 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 ZNF695Q8IW36 515 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 ZNF645Q8N7E2 425 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 FAM216BQ8N7L0 139 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 TCTEX1D1Q8N7M0 179 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 OR11H4Q8NGC9 324 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 OR10A7Q8NGE5 316 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 RFESDQ8TAC1 157 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 GLYATL2Q8WU03 294 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 PPP1R1CQ8WVI7 109 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 RAB1CQ92928 201 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 RAB39BQ96DA2 213 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 MSI2Q96DH6 328 aaKnown RBP5.85□□□□□ -1.47
SF3A3-206ENST00000487062 TIMD4Q96H15 378 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 TP53RKQ96S44 253 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 SPIN2AQ99865 258 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 ARPC5LQ9BPX5 153 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 SPIN2BQ9BPZ2 258 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 TMEM246Q9BRR3 403 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 DCTN5Q9BTE1 182 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 GON7Q9BXV9 100 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 GAL3ST2Q9H3Q3 398 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 PLEKHF2Q9H8W4 249 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 LIN7CQ9NUP9 197 aaKnown RBP5.85□□□□□ -1.47
SF3A3-206ENST00000487062 DCAF16Q9NXF7 216 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 IDI2-AS1Q9NZ38 188 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 PRR13Q9NZ81 148 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 CLN8Q9UBY8 286 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 LINC00312Q9Y6C7 94 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 HIVEP3Q5T1R4 2406 aa5.85□□□□□ -1.47
SF3A3-206ENST00000487062 IGHV3-43A0A0B4J1X8 118 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 G3V3Q6 166 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 C19orf84I3L1E1 186 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 TNFRSF13BO14836 293 aaPredicted RBP5.84□□□□□ -1.47
SF3A3-206ENST00000487062 ARPC5O15511 151 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 TNFSF12O43508 249 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 MPC2O95563 127 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 CDS2O95674 445 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 SERPINE2P07093 398 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 CGB3P0DN86 165 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 CGB7P0DN87 165 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 IGHV3-43DP0DP04 118 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 RPA2P15927 270 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 COL8A2P25067 703 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 PPP1CCP36873 323 aaKnown RBP5.84□□□□□ -1.47
SF3A3-206ENST00000487062 RAB7AP51149 207 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 RPL31P62899 125 aaKnown RBP5.84□□□□□ -1.47
SF3A3-206ENST00000487062 GNMTQ14749 295 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 LTC4SQ16873 150 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 C17orf58Q2M2W7 97 aa5.84□□□□□ -1.47
SF3A3-206ENST00000487062 IAH1Q2TAA2 248 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms