RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ITGB1BP1O14713 200 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 HS3ST1O14792 307 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 MPLP40238 635 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 LHX2P50458 406 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 FUT6P51993 359 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 YPEL3P61236 119 aaPredicted RBP9.06□□□□□ -0.96
CCDC171-208ENST00000486641 MSMO1Q15800 293 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 TMEM42Q69YG0 159 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 OR5AU1Q8NGC0 362 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 OR10G9Q8NGN4 311 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 OR10G7Q8NGN6 311 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 TMEM54Q969K7 222 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 ZDHHC11Q9H8X9 412 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 RNF114Q9Y508 228 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 F5P12259 2224 aa9.06□□□□□ -0.96
CCDC171-208ENST00000486641 PGPEP1LA6NFU8 196 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 CD300LBA8K4G0 201 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 DHHO43323 396 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 IGHV4-34P06331 123 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 ESDP10768 282 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 CRYGSP22914 178 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 PTGDSP41222 190 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 CDKN1BP46527 198 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 SLC38A11Q08AI6 406 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 OR8G2PQ6IF36 304 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 TMEM92Q6UXU6 159 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 FOXL2NBQ6ZUU3 175 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 ZNF114Q8NC26 417 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 OR1L3Q8NH93 324 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 PIGCQ92535 297 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 WIPI2Q9Y4P8 454 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 IGHV3-15A0A0B4J1V0 119 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 LOC102725191A0A1B0GVB3 256 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 OR6C6A6NF89 314 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 C11orf94C9JXX5 98 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 F2Z2F3 143 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 AQP7O14520 342 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 HSPB6O14558 160 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 NAPSAO96009 420 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 CRYAAP02489 173 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 OR5G3P0C626 314 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 CD99P14209 185 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 EPHA8P29322 1005 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-208ENST00000486641 CEACAM8P31997 349 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-208ENST00000486641 PMP22Q01453 160 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 NOGQ13253 232 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 PLCXD3Q63HM9 321 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 ZNF611Q8N823 705 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 ZNF709Q8N972 641 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 ZNF501Q96CX3 271 aaPredicted RBP9.05□□□□□ -0.96
CCDC171-208ENST00000486641 BTF3L4Q96K17 158 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 TECTBQ96PL2 329 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 HS3ST6Q96QI5 342 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 DERL1Q9BUN8 251 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 TIMM9Q9Y5J7 89 aa9.05□□□□□ -0.96
CCDC171-208ENST00000486641 IGKV1-5P01602 117 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 DEFA4P12838 97 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 CRISP2P16562 243 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 CD38P28907 300 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 CTRLP40313 264 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 FASLGP48023 281 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 KLF3P57682 345 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-208ENST00000486641 GNB1P62873 340 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 SRSF7Q16629 238 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCDC171-208ENST00000486641 FFAR4Q5NUL3 377 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 ZNF468Q5VIY5 522 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-208ENST00000486641 ETFRF1Q6IPR1 90 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 PCSK4Q6UW60 755 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 Q6ZVH6 145 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 Q8N976 141 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 OR1L6Q8NGR2 347 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 ORAOV1Q8WV07 137 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 ALKBH3Q96Q83 286 aaPredicted RBP9.04□□□□□ -0.96
CCDC171-208ENST00000486641 FBXL7Q9UJT9 491 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 SLC45A2Q9UMX9 530 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 RBFOX2O43251 390 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCDC171-208ENST00000486641 SYNGR3O43761 229 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 BMP5P22003 454 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 CBLN1P23435 193 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 AARDQ4LEZ3 155 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 C1orf53Q5VUE5 145 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 LSM10Q969L4 123 aaKnown RBP9.04□□□□□ -0.96
CCDC171-208ENST00000486641 FER1L5A0AVI2 2057 aa9.04□□□□□ -0.96
CCDC171-208ENST00000486641 K7EP13 123 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 TMPRSS2O15393 492 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 NDUFB4O95168 129 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 PATE4P0C8F1 98 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 CCL5P13501 91 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 BCL3P20749 454 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 SPATA45Q537H7 98 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 FAM69BQ5VUD6 431 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 RHBDD2Q6NTF9 364 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 TIPARPQ7Z3E1 657 aaKnown RBP9.03□□□□□ -0.96
CCDC171-208ENST00000486641 LYG1Q8N1E2 194 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 OR2M3Q8NG83 312 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 OR10G3Q8NGC4 313 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 OR4B1Q8NGF8 309 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 RNF138Q8WVD3 245 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 OR5P3Q8WZ94 311 aa9.03□□□□□ -0.96
CCDC171-208ENST00000486641 SFRP2Q96HF1 295 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms