RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 WNT5BQ9H1J7 359 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 NAT8Q9UHE5 227 aa9.52□□□□□ -0.89
HDAC6-228ENST00000486227 CRYM-AS1A6NIL9 109 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 HNF1AP20823 631 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 GPR6P46095 362 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-228ENST00000486227 TMEM267Q0VDI3 215 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-228ENST00000486227 CEACAM21Q3KPI0 293 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 LURAP1LQ8IV03 231 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 ABHD17AQ96GS6 310 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 RHOVQ96L33 236 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 NDUFA2O43678 99 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 MST1P26927 711 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 EWSR1Q01844 656 aaKnown RBP eCLIP9.51□□□□□ -0.89
HDAC6-228ENST00000486227 KHDC3LQ587J8 217 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 C10orf128Q5T292 105 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 LYRM2Q9NU23 88 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-228ENST00000486227 SPTBN1Q01082 2364 aaKnown RBP9.51□□□□□ -0.89
HDAC6-228ENST00000486227 ANAPC1Q9H1A4 1944 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 DEDDO75618 318 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 HKR1P10072 659 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 PMELP40967 661 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 UCP2P55851 309 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 VOPP1Q96AW1 172 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 TIMP4Q99727 224 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 C9orf172C9J069 976 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 RPL36A-HNRNPH2H7BZ11 118 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 J3QRE1 110 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 KLF7O75840 302 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-228ENST00000486227 CDS2O95674 445 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 CD59P13987 128 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 BRS3P32247 399 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 RAB7AP51149 207 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 LYZL2Q7Z4W2 148 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 OR2T10Q8NGZ9 312 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.51□□□□□ -0.89
HDAC6-228ENST00000486227 CLN8Q9UBY8 286 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 RAXQ9Y2V3 346 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 FREM3P0C091 2139 aa9.51□□□□□ -0.89
HDAC6-228ENST00000486227 LOC102723996A0A087X1L8 192 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 UBE2L5PA0A1B0GUS4 154 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 A0A1B0GV90 55 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 FCGR3AP08637 254 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 KLK2P20151 261 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 ZNF385CQ66K41 422 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-228ENST00000486227 FADS6Q8N9I5 356 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 KLHDC3Q9BQ90 382 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 MYLKQ15746 1914 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 CXorf65A6NEN9 183 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 E9PQ18 207 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 NPIPB7O75200 414 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 HRASP01112 189 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 TRGC2P03986 189 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 ATP6V0CP27449 155 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 KDF1Q8NAX2 398 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-228ENST00000486227 SOX7Q9BT81 388 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 GPR61Q9BZJ8 451 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 ZNF703Q9H7S9 590 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-228ENST00000486227 A0A1B0GTI1 187 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
HDAC6-228ENST00000486227 KRTDAPP60985 99 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 IGFBP7Q16270 282 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 TMEM54Q969K7 222 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 TMEM230Q96A57 120 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 ZNF837Q96EG3 531 aaPredicted RBP9.5□□□□□ -0.89
HDAC6-228ENST00000486227 SFXN3Q9BWM7 321 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 FKBP11Q9NYL4 201 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 A0A087WV48 116 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 DUXBA0A1W2PPF3 345 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 SLC31A2O15432 143 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 P2RY4P51582 365 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 DYNLT3P51808 116 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 SPINK9Q5DT21 86 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 OR1K1Q8NGR3 316 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 TUBA4BQ9H853 241 aa9.5□□□□□ -0.89
HDAC6-228ENST00000486227 K7EQM0 130 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 NTN3O00634 580 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-228ENST00000486227 SYNGR1O43759 233 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 ZNF737O75373 536 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 VDAC1P21796 283 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 AESQ08117 197 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 SLC35E3Q7Z769 313 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 ATP5SQ99766 215 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 ZNF331Q9NQX6 463 aaPredicted RBP9.49□□□□□ -0.89
HDAC6-228ENST00000486227 CISD1Q9NZ45 108 aaKnown RBP9.49□□□□□ -0.89
HDAC6-228ENST00000486227 DOCK9Q9BZ29 2069 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 A0A1W2PRD5 423 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 A0A1W2PRF3 423 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 A0A1W2PRM7 423 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 FGF16O43320 207 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 RPLP1P05386 114 aaKnown RBP9.49□□□□□ -0.89
HDAC6-228ENST00000486227 ERVS71-1P61550 626 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 VAMP3Q15836 100 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 C21orf62-AS1Q17RA5 79 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 ASCL5Q7RTU5 278 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 TPRX1Q8N7U7 411 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 OR10C1Q96KK4 312 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 FAM103A1Q9BTL3 118 aaKnown RBP9.49□□□□□ -0.89
HDAC6-228ENST00000486227 COA4Q9NYJ1 87 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 VAX2Q9UIW0 290 aa9.49□□□□□ -0.89
HDAC6-228ENST00000486227 PRR32B1ATL7 298 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms