RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 RPS27AP62979 156 aaKnown RBP7.39□□□□□ -1.23
NUP50-215ENST00000484186 CFHR3Q02985 330 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 LSAMPQ13449 338 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 MMDQ15546 238 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 HSD17B12Q53GQ0 312 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 LCNL1Q6ZST4 164 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 C6orf201Q7Z4U5 140 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 CEACAM19Q7Z692 300 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 ODF3L1Q8IXM7 274 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 OR8U1Q8NH10 309 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 KCNG3Q8TAE7 436 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 KCTD7Q96MP8 289 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 NABP2Q9BQ15 211 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 CHCHD6Q9BRQ6 235 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 TM2D1Q9BX74 207 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 TMEM59Q9BXS4 323 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 SCN3BQ9NY72 215 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 ZNF107Q9UII5 783 aaPredicted RBP7.39□□□□□ -1.23
NUP50-215ENST00000484186 ZNF580Q9UK33 172 aa7.39□□□□□ -1.23
NUP50-215ENST00000484186 LSM2Q9Y333 95 aaKnown RBP7.39□□□□□ -1.23
NUP50-215ENST00000484186 TMEM14DPA8MWL7 114 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 SLC22A1O15245 554 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 UCHL1P09936 223 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 OR5H8P0DN80 308 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 SLC2A2P11168 524 aaPredicted RBP7.38□□□□□ -1.23
NUP50-215ENST00000484186 MYF6P23409 242 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 PSMB8P28062 276 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 HTR2CP28335 458 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 RAB25P57735 213 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 ACTBP60709 375 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 UNC119Q13432 240 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 IRF3Q14653 427 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 MED22Q15528 200 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 HMGN3Q15651 99 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 VAX1Q5SQQ9 334 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 ZNF880Q6PDB4 577 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 ZNF833PQ6ZTB9 187 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 OR2AK2Q8NG84 335 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 RITA1Q96K30 269 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 ZNF251Q9BRH9 671 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 MRPL20Q9BYC9 149 aaKnown RBP7.38□□□□□ -1.23
NUP50-215ENST00000484186 VCX3BQ9H321 246 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 PLEKHJ1Q9NW61 149 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 ABRACLQ9P1F3 81 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 STEAP1Q9UHE8 339 aa7.38□□□□□ -1.23
NUP50-215ENST00000484186 SAA2-SAA4A0A096LPE2 208 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 RAMP3O60896 148 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 BPNT1O95861 308 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 NAPSAO96009 420 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 HLA-DRB1P01911 266 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 SAA2P0DJI9 122 aaPredicted RBP7.37□□□□□ -1.23
NUP50-215ENST00000484186 CNTFRP26992 372 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 BLVRBP30043 206 aaPredicted RBP7.37□□□□□ -1.23
NUP50-215ENST00000484186 PPIFP30405 207 aaKnown RBP7.37□□□□□ -1.23
NUP50-215ENST00000484186 OR3A3P47888 321 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 QRFPP83859 136 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 DGCR2P98153 550 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 DEFB136Q30KP8 78 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 LIPKQ5VXJ0 399 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 LIN54Q6MZP7 749 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 TMEM65Q6PI78 240 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 SVOPQ8N4V2 548 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 NPBQ8NG41 125 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 OR6M1Q8NGM8 313 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 OR5M8Q8NGP6 311 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 C4orf3Q8WVX3 66 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 IL1F10Q8WWZ1 152 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 UFD1Q92890 307 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 TMEM203Q969S6 136 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 NICN1Q9BSH3 213 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 URM1Q9BTM9 101 aaKnown RBP7.37□□□□□ -1.23
NUP50-215ENST00000484186 OR51J1Q9H342 316 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 RIMS4Q9H426 269 aaPredicted RBP7.37□□□□□ -1.23
NUP50-215ENST00000484186 KCNK15Q9H427 330 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 CHMP1AQ9HD42 196 aaPredicted RBP7.37□□□□□ -1.23
NUP50-215ENST00000484186 PIPOXQ9P0Z9 390 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 NKX1-2Q9UD57 310 aaPredicted RBP7.37□□□□□ -1.23
NUP50-215ENST00000484186 TPRKBQ9Y3C4 175 aa7.37□□□□□ -1.23
NUP50-215ENST00000484186 A0A0A6YYD4 124 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 TRBV6-6A0A0A6YYG2 114 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 IGHV7-81A0A0B4J1V7 117 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 G3V318 75 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 ITGB1BP1O14713 200 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 RAB29O14966 203 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 NBR2O15453 112 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 ST8SIA5O15466 376 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 SOCS1O15524 211 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 NDUFA3O95167 84 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 HSMCR30P0CW71 290 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 ARSBP15848 533 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 AQP4P55087 323 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 CD69Q07108 199 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 DCTN2Q13561 401 aaKnown RBP7.36□□□□□ -1.23
NUP50-215ENST00000484186 TPBGQ13641 420 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 KIAA0141Q14154 515 aaPredicted RBP7.36□□□□□ -1.23
NUP50-215ENST00000484186 TRAM1Q15629 374 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 C5orf64Q2M2E5 130 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 C9orf66Q5T8R8 295 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 FAM71F2Q6NXP2 309 aa7.36□□□□□ -1.23
NUP50-215ENST00000484186 TMEM91Q6ZNR0 172 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms