RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 ZDHHC8Q9ULC8 765 aa5.78□□□□□ -1.48
BRCA1-216ENST00000484087 FBN1P35555 2871 aaKnown RBP5.78□□□□□ -1.48
BRCA1-216ENST00000484087 FXYD6-FXYD2A0A087WZ82 144 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 C13orf42A0A1B0GVH6 325 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 CRYM-AS1A6NIL9 109 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 C17orf100A8MU93 164 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 KIAA1324LA8MWY0 1029 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 ARPC5O15511 151 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 HSPA12AO43301 675 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 CD5LO43866 347 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 IGHV1-46P01743 117 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 PET100P0DJ07 73 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 IRF2P14316 349 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SLC25A16P16260 332 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 USF1P22415 310 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 AADACP22760 399 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 LMO1P25800 156 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 NUP62P37198 522 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SRPXP78539 464 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 IFITM2Q01629 132 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 C2orf68Q2NKX9 166 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 LGALSLQ3ZCW2 172 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 DCAF12L2Q5VW00 463 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 ZNF880Q6PDB4 577 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 C11orf53Q8IXP5 236 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 CMTM1Q8IZ96 169 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 OR11H4Q8NGC9 324 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 OR11L1Q8NGX0 322 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 LRRC29Q8WV35 223 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 RTN4IP1Q8WWV3 396 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 ERGIC1Q969X5 290 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 MSI2Q96DH6 328 aaKnown RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 CYYR1Q96J86 154 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 MEGF10Q96KG7 1140 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 OR2V2Q96R30 315 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 NMES1Q9C002 83 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 FXYD6Q9H0Q3 95 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 NAA60Q9H7X0 242 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 DNAJB11Q9UBS4 358 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 MXRA5Q9NR99 2828 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 DBX1A6NMT0 343 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 FAM157AC9JC47 383 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 GPR31O00270 319 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 CCSO14618 274 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 RP2O75695 350 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 ZNF205O95201 554 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 PTBP3O95758 552 aaKnown RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 IFNA7P01567 189 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SCTP09683 121 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SLC25A4P12235 298 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 TNFRSF1AP19438 455 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 CFHR2P36980 270 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SUPT4H1P63272 117 aaKnown RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 TNFAIP6P98066 277 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 LOXL1Q08397 574 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 ATXN7L3Q14CW9 347 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 PHLDA2Q53GA4 152 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 IGSF11Q5DX21 431 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 LY6G6FQ5SQ64 297 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 C6orf183Q5T699 404 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 LAMTOR1Q6IAA8 161 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SLC35E4Q6ICL7 350 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 C11orf87Q6NUJ2 197 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 TRAT1Q6PIZ9 186 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 ZNF497Q6ZNH5 498 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 ZNF826PQ6ZT77 177 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 ZNF546Q86UE3 836 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 LGI3Q8N145 548 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 INO80EQ8NBZ0 244 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 OR8H1Q8NGG4 311 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 CLDND2Q8NHS1 167 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SECTM1Q8WVN6 248 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 NEU4Q8WWR8 484 aaPredicted RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 IL1F10Q8WWZ1 152 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 GALNT14Q96FL9 552 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SEC22AQ96IW7 307 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SLC5A7Q9GZV3 580 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 MFFQ9GZY8 342 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 DNTTIP1Q9H147 329 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 SLC2A9Q9NRM0 540 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 ZFP57Q9NU63 452 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 IL19Q9UHD0 177 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 WIPI2Q9Y4P8 454 aa5.77□□□□□ -1.49
BRCA1-216ENST00000484087 RBM7Q9Y580 266 aaKnown RBP5.77□□□□□ -1.49
BRCA1-216ENST00000484087 TRBV6-7A0A0A0MS04 114 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 A0A0D9SG52 128 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 OOEPA6NGQ2 149 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 LRRC30A6NM36 301 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 SRRM5B3KS81 715 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 NPIPB11E5RHQ5 1161 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 G3V3Q6 166 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 PHF1O43189 567 aaPredicted RBP5.76□□□□□ -1.49
BRCA1-216ENST00000484087 PPIHO43447 177 aaKnown RBP5.76□□□□□ -1.49
BRCA1-216ENST00000484087 ATP6V1G1O75348 118 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 B3GALNT1O75752 331 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 RLN2P04090 185 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 HOXB5P09067 269 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 RPS2P15880 293 aaKnown RBP5.76□□□□□ -1.49
BRCA1-216ENST00000484087 RPA2P15927 270 aa5.76□□□□□ -1.49
BRCA1-216ENST00000484087 RCC1P18754 421 aaPredicted RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms