RNA–Protein interactions for RNA: ENST00000483876.1

COL17A1-206, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 622 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-206ENST00000483876 MSI2Q96DH6 328 aaKnown RBP4.52□□□□□ -1.69
COL17A1-206ENST00000483876 WDR89Q96FK6 387 aaPredicted RBP4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PDCD10Q9BUL8 212 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 MFFQ9GZY8 342 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 TMEM222Q9H0R3 208 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 METTL8Q9H825 291 aaKnown RBP4.52□□□□□ -1.69
COL17A1-206ENST00000483876 HEXA-AS1Q9H8Q6 139 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 LINC00574Q9H8X3 128 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 TAF9BQ9HBM6 251 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PLSCR3Q9NRY6 295 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 UFSP2Q9NUQ7 469 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 DNAJB11Q9UBS4 358 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 CDC42EP3Q9UKI2 254 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 GAB2Q9UQC2 676 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PPP1R3CQ9UQK1 317 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 U3KQ87 197 aa4.52□□□□□ -1.69
COL17A1-206ENST00000483876 PRR14LQ5THK1 2151 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 TRAV14DV4A0A0A6YYC5 116 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 C13orf42A0A1B0GVH6 325 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 C5orf51A6NDU8 294 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 TUBAL3A6NHL2 446 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 E7EQL1 145 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 M0R233 179 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 TNFRSF13BO14836 293 aaPredicted RBP4.51□□□□□ -1.69
COL17A1-206ENST00000483876 WNT9BO14905 357 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 SPINT2O43291 252 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 SPRY3O43610 288 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 RLN2P04090 185 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 SLC25A6P12236 298 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 IRF2P14316 349 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 CXCL2P19875 107 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 VDAC1P21796 283 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 F2RP25116 425 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 UCP1P25874 307 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 CEACAM6P40199 344 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 FXYD4P59646 89 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 SRSF2Q01130 221 aaKnown RBP4.51□□□□□ -1.69
COL17A1-206ENST00000483876 SLC9A3R2Q15599 337 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 SWI5Q1ZZU3 235 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 MST1LQ2TV78 715 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 MIDNQ504T8 468 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 KRBOX4Q5JUW0 171 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 ALKBH2Q6NS38 261 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 PRSS54Q6PEW0 395 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 VHLLQ6RSH7 139 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 C12orf54Q6X4T0 127 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF788Q6ZQV5 615 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 TMUB2Q71RG4 321 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 MOGAT3Q86VF5 341 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 C1orf87Q8N0U7 546 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 BATF2Q8N1L9 274 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 KCNRGQ8N5I3 272 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 INO80EQ8NBZ0 244 aaPredicted RBP4.51□□□□□ -1.69
COL17A1-206ENST00000483876 ZNF680Q8NEM1 530 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 OR10A7Q8NGE5 316 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 OR10V1Q8NGI7 309 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 ITLN1Q8WWA0 313 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 CORO2AQ92828 525 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 TOMM40LQ969M1 308 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 COQ2Q96H96 371 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 ABHD14BQ96IU4 210 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 SEC22AQ96IW7 307 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 TMEM204Q9BSN7 226 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 RNF126Q9BV68 326 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 SLC5A7Q9GZV3 580 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 FXYD6Q9H0Q3 95 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 BEX4Q9NWD9 120 aaPredicted RBP4.51□□□□□ -1.69
COL17A1-206ENST00000483876 OR6C3Q9NZP0 311 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 OR14J1Q9UGF5 321 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 KIF25Q9UIL4 384 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 TNFSF18Q9UNG2 199 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 CADP27708 2225 aa4.51□□□□□ -1.69
COL17A1-206ENST00000483876 FXYD6-FXYD2A0A087WZ82 144 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 TRAV38-1A0A0B4J264 116 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 IGKV1D-13A0A0B4J2D9 117 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 ODAMA1E959 279 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 NKX2-6A6NCS4 301 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 FAM25EA8MYX2 175 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 C12orf77C9JDV5 145 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 H0Y980 276 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 C15orf65H3BRN8 121 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 LGALS8O00214 317 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 F2RL2O00254 374 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 HSPB6O14558 160 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 TAAR5O14804 337 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 ARPC5O15511 151 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 HSPA12AO43301 675 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 YPEL1O60688 119 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 ADAP1O75689 374 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 IGLV2-14P01704 120 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 HBZP02008 142 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 OR5AC1P0C628 307 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 FAM157CP0CG43 387 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 IGKV1-13P0DP09 117 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 MMP9P14780 707 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 IL2RGP31785 369 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 NUP62P37198 522 aaPredicted RBP4.5□□□□□ -1.69
COL17A1-206ENST00000483876 P2RX3P56373 397 aa4.5□□□□□ -1.69
COL17A1-206ENST00000483876 SNRPD2P62316 118 aaKnown RBP4.5□□□□□ -1.69
COL17A1-206ENST00000483876 MRPS11P82912 194 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms