RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 NAA60Q9H7X0 242 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 PATZ1Q9HBE1 687 aaKnown RBP8.32□□□□□ -1.08
HDAC6-226ENST00000483656 OR2S2Q9NQN1 319 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 GFOD1Q9NXC2 390 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 TAS2R3Q9NYW6 316 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 IDI2-AS1Q9NZ38 188 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 PIPOXQ9P0Z9 390 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 MGAT4CQ9UBM8 478 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 MIOXQ9UGB7 285 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 JPT1Q9UK76 154 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 CRYBG3Q68DQ2 2970 aa8.32□□□□□ -1.08
HDAC6-226ENST00000483656 C2CD3Q4AC94 2353 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 A0A0B4J2A0 478 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 DBX1A6NMT0 343 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 SLC31A2O15432 143 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 MPPED1O15442 326 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 YPEL1O60688 119 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 PGLYRP1O75594 196 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-226ENST00000483656 SIX6O95475 246 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 VAMP1P23763 118 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 CD34P28906 385 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 ZNF134P52741 427 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 EIF4EBP1Q13541 118 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-226ENST00000483656 TMEM187Q14656 261 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 ABCA11PQ4W5N1 156 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 LY6G6FQ5SQ64 297 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 PRAMEF5Q5TYX0 476 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 NLRC3Q7RTR2 1065 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 FAM185AQ8N0U4 392 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 C11orf42Q8N5U0 333 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 UXS1Q8NBZ7 420 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 ZNF439Q8NDP4 499 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 BVESQ8NE79 360 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 RTN4IP1Q8WWV3 396 aaPredicted RBP8.31□□□□□ -1.08
HDAC6-226ENST00000483656 GALNT14Q96FL9 552 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 PSMG3-AS1Q96PY0 264 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 YPEL2Q96QA6 119 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 AGMATQ9BSE5 352 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 SHPKQ9UHJ6 478 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 RNF150Q9ULK6 438 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 CENPEQ02224 2701 aa8.31□□□□□ -1.08
HDAC6-226ENST00000483656 TRBV23-1A0A0A0MS06 115 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 TEX13DA0A0J9YY54 714 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-226ENST00000483656 ST8SIA5O15466 376 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 PROP1O75360 226 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 OR2A4O95047 310 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 IFNA2P01563 188 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 IGHV3-7P01780 117 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 PAX1P15863 534 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 HLA-GP17693 338 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 SP6Q3SY56 376 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 DCAF12L2Q5VW00 463 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 TBC1D26Q86UD7 250 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 SGPP2Q8IWX5 399 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 TCTE3Q8IZS6 198 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 DRAM1Q8N682 238 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 CCDC71LQ8N9Z2 235 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 LY6G5BQ8NDX9 201 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 OR10A7Q8NGE5 316 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 OR8B3Q8NGG8 313 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 OR52M1Q8NGK5 317 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 C8orf46Q8TAG6 207 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 LEAP2Q969E1 77 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 AKR1E2Q96JD6 320 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 DMRTB1Q96MA1 342 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 ZNF714Q96N38 554 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 OR2A7Q96R45 310 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 OR8B2Q96RD0 313 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 TP53RKQ96S44 253 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 ZNF436Q9C0F3 470 aaPredicted RBP8.3□□□□□ -1.08
HDAC6-226ENST00000483656 NARFLQ9H6Q4 476 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 GNG12Q9UBI6 72 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 LPAR3Q9UBY5 353 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 RPUSD1Q9UJJ7 312 aaKnown RBP8.3□□□□□ -1.08
HDAC6-226ENST00000483656 CELSR2Q9HCU4 2923 aa8.3□□□□□ -1.08
HDAC6-226ENST00000483656 MALRD1Q5VYJ5 2156 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 C17orf98A8MV24 154 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 C22orf46C9J442 243 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 G3V3Q6 166 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 SMLR1H3BR10 107 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 CCSO14618 274 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 GOSR2O14653 212 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 ITGB1BP1O14713 200 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 GPR37O15354 613 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 PHF1O43189 567 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-226ENST00000483656 TNFSF12O43508 249 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 SLC22A5O76082 557 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 HNRNPCP07910 306 aaKnown RBP eCLIP8.29□□□□□ -1.08
HDAC6-226ENST00000483656 OR5AC1P0C628 307 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 PDLIM4P50479 330 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 H2BFSP57053 126 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 LMO4P61968 165 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 MSMO1Q15800 293 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 TMEM30BQ3MIR4 351 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 CT45A1Q5HYN5 189 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 HEPN1Q6WQI6 88 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 C1orf229Q6ZS94 237 aaPredicted RBP8.29□□□□□ -1.08
HDAC6-226ENST00000483656 KCTD9Q7L273 389 aa8.29□□□□□ -1.08
HDAC6-226ENST00000483656 CT45A3Q8NHU0 189 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms