RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 ITGB1BP1O14713 200 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 UMODP07911 640 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 MMDQ15546 238 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 LHFPL2Q6ZUX7 228 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 TMEM252Q8N6L7 170 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 OR2T10Q8NGZ9 312 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 ZCCHC14Q8WYQ9 949 aaKnown RBP10.63□□□□□ -0.71
CCDC78-213ENST00000482878 TXN2Q99757 166 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 APC2O95996 2303 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 LY6G6EA0A0G2JKS1 128 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 PITX3O75364 302 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 B4GALT1P15291 398 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 ZNF32P17041 273 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 TCN2P20062 427 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 DSCR4P56555 118 aaPredicted RBP10.63□□□□□ -0.71
CCDC78-213ENST00000482878 TMEM241Q24JQ0 296 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 TMEM42Q69YG0 159 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 CALHM1Q8IU99 346 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 SLC35E1Q96K37 410 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 MSL2Q9HCI7 577 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 WNT16Q9UBV4 365 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 UBE2J1Q9Y385 318 aaPredicted RBP10.63□□□□□ -0.71
CCDC78-213ENST00000482878 U3KQA8 63 aa10.63□□□□□ -0.71
CCDC78-213ENST00000482878 DOCK10Q96BY6 2186 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 MAP1LC3B2A6NCE7 125 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 EPHA8P29322 1005 aaPredicted RBP10.62□□□□□ -0.71
CCDC78-213ENST00000482878 DAZAP2Q15038 168 aaPredicted RBP10.62□□□□□ -0.71
CCDC78-213ENST00000482878 COA6Q5JTJ3 125 aaKnown RBP10.62□□□□□ -0.71
CCDC78-213ENST00000482878 SPIN3Q5JUX0 258 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 ALKBH3Q96Q83 286 aaPredicted RBP10.62□□□□□ -0.71
CCDC78-213ENST00000482878 MAP1LC3BQ9GZQ8 125 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 C11orf1Q9H5F2 150 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 TRAPPC1Q9Y5R8 145 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 LOC102724200A0A096LPH7 203 aaPredicted RBP10.62□□□□□ -0.71
CCDC78-213ENST00000482878 A0A0U1RQK1 487 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 ZNF320A2RRD8 509 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 OR5G3P0C626 314 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 FGFBP3Q8TAT2 258 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 SCGB1C1Q8TD33 95 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 ZNF845Q96IR2 970 aaPredicted RBP10.62□□□□□ -0.71
CCDC78-213ENST00000482878 GPHA2Q96T91 129 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 NAT8Q9UHE5 227 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 TCFL5Q9UL49 500 aa10.62□□□□□ -0.71
CCDC78-213ENST00000482878 C3orf85A0A1B0GTC6 90 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 CCL25O15444 150 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 PDCD6O75340 191 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 PPYP01298 95 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 IGHEP01854 428 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 PFN1P07737 140 aaKnown RBP10.61□□□□□ -0.71
CCDC78-213ENST00000482878 CHRNA7P36544 502 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 HERV-K104P61576 105 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 IL24Q13007 206 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 ZNF695Q8IW36 515 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 CMTM2Q8TAZ6 248 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 ALKBH7Q9BT30 221 aaPredicted RBP10.61□□□□□ -0.71
CCDC78-213ENST00000482878 DUSP23Q9BVJ7 150 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 ZNF442Q9H7R0 627 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 TMEM9BQ9NQ34 198 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 TMEM38BQ9NVV0 291 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 RNF150Q9ULK6 438 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 HMGB3O15347 200 aaKnown RBP10.61□□□□□ -0.71
CCDC78-213ENST00000482878 MPPED1O15442 326 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 NXPH2O95156 264 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 IFNA1P01562 189 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 PSG4Q00888 419 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 MALLQ13021 153 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 LINC00696Q6ZRV3 163 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 Q6ZVH6 145 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 VASH2Q86V25 355 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 MYPOPQ86VE0 399 aaPredicted RBP10.61□□□□□ -0.71
CCDC78-213ENST00000482878 OR4C5Q8NGB2 326 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 RSG1Q9BU20 258 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 SAMD10Q9BYL1 202 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 GLRX2Q9NS18 164 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 FREM1Q5H8C1 2179 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 SHANK1Q9Y566 2161 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 IGHV1-45A0A0A0MS14 117 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 OR6C6A6NF89 314 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 GNRHRP30968 328 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 NPBWR2P48146 333 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 RANP62826 216 aaKnown RBP10.61□□□□□ -0.71
CCDC78-213ENST00000482878 RAC1P63000 192 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 ZNF468Q5VIY5 522 aaPredicted RBP10.61□□□□□ -0.71
CCDC78-213ENST00000482878 SMIM15Q7Z3B0 74 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 CCDC71LQ8N9Z2 235 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 AGBL5Q8NDL9 886 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 PIGCQ92535 297 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 CADP27708 2225 aa10.61□□□□□ -0.71
CCDC78-213ENST00000482878 EML6Q6ZMW3 1958 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 GRIFINA4D1Z8 144 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 LRRC3CA6NJW4 275 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 TNFSF13O75888 250 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 OR7C1O76099 320 aaPredicted RBP10.6□□□□□ -0.71
CCDC78-213ENST00000482878 HRASP01112 189 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 ZFP36L1Q07352 338 aaKnown RBP10.6□□□□□ -0.71
CCDC78-213ENST00000482878 CXorf66Q5JRM2 361 aaPredicted RBP10.6□□□□□ -0.71
CCDC78-213ENST00000482878 FAM78BQ5VT40 261 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 PLCXD3Q63HM9 321 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 OR51G1Q8NGK1 321 aa10.6□□□□□ -0.71
CCDC78-213ENST00000482878 IMMP1LQ96LU5 166 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms