RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 PAXXQ9BUH6 204 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 RNF115Q9Y4L5 304 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 CASP8AP2Q9UKL3 1982 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 LOC390937A0A1W2PQ73 354 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 EREGO14944 169 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 SPNP16150 400 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 HLA-DRB5Q30154 266 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 C19orf53Q9UNZ5 99 aaPredicted RBP10.12□□□□□ -0.79
TRIM27-205ENST00000481474 IGHV5-10-1A0A0J9YXX1 117 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 GPX5O75715 221 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 IGHV4-39P01824 125 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 RPS4Y2Q8TD47 263 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 MRGPRX3Q96LB0 322 aa10.12□□□□□ -0.79
TRIM27-205ENST00000481474 KBTBD11O94819 623 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 PRDX2P32119 198 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 TMEM42Q69YG0 159 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 ATRNO75882 1429 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 CEACAM18A8MTB9 384 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 MMP16P51512 607 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 S100A7L2Q5SY68 101 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 NRG4Q8WWG1 115 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 NUP214P35658 2090 aaPredicted RBP10.11□□□□□ -0.79
TRIM27-205ENST00000481474 DOCK9Q9BZ29 2069 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 TYROBPO43914 113 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 PRB2P02812 416 aaPredicted RBP10.11□□□□□ -0.79
TRIM27-205ENST00000481474 LIMS3P0CW19 117 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 LIMS4P0CW20 117 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 JMJD6Q6NYC1 403 aaPredicted RBP10.11□□□□□ -0.79
TRIM27-205ENST00000481474 GVQW1Q8N7I0 195 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 ADTRPQ96IZ2 230 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 SFXN3Q9BWM7 321 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 PIKFYVEQ9Y2I7 2098 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 IGHV1OR21-1A0A087WYE8 117 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 GDF9O60383 454 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 FABP2P12104 132 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 COL9A1P20849 921 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 BAK1Q16611 211 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 CLEC19AQ6UXS0 136 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 ELOA3CA0A087WX78 387 aaPredicted RBP10.11□□□□□ -0.79
TRIM27-205ENST00000481474 DDOSTP39656 456 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 DND1Q8IYX4 353 aaKnown RBP10.11□□□□□ -0.79
TRIM27-205ENST00000481474 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 VKORC1L1Q8N0U8 176 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 OR10AC1Q8NH08 325 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 PTP4A1Q93096 173 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 SIGLEC12Q96PQ1 595 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 CHCHD5Q9BSY4 110 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 ALKBH7Q9BT30 221 aaPredicted RBP10.11□□□□□ -0.79
TRIM27-205ENST00000481474 CNOT2Q9NZN8 540 aaKnown RBP10.11□□□□□ -0.79
TRIM27-205ENST00000481474 MIOXQ9UGB7 285 aa10.11□□□□□ -0.79
TRIM27-205ENST00000481474 M0R143 59 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 RPL27AP46776 148 aaKnown RBP10.1□□□□□ -0.79
TRIM27-205ENST00000481474 BSXQ3C1V8 233 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 TMEM255AQ5JRV8 349 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 EVA1AQ9H8M9 152 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 HSPB7Q9UBY9 170 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 EP300Q09472 2414 aaPredicted RBP10.1□□□□□ -0.79
TRIM27-205ENST00000481474 ASAH1Q13510 395 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 TRA2AQ13595 282 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRIM27-205ENST00000481474 OR5A1Q8NGJ0 315 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 ZNF625Q96I27 306 aaPredicted RBP10.1□□□□□ -0.79
TRIM27-205ENST00000481474 C11orf94C9JXX5 98 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 K7N7A8 449 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 SCG5P05408 212 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 NPPCP23582 126 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 ELOBQ15370 118 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 ZXDCQ2QGD7 858 aaPredicted RBP10.1□□□□□ -0.79
TRIM27-205ENST00000481474 OR10J3Q5JRS4 329 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 ALPK2Q86TB3 2170 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 PPLO60437 1756 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 PGA4P0DJD7 388 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 PGA3P0DJD8 388 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 PGA5P0DJD9 388 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 ERGP11308 486 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 EGR3Q06889 387 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 KIR3DL3Q8N743 410 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 MYO5BQ9ULV0 1848 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 LILRA1O75019 489 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 RAC3P60763 192 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 C10orf128Q5T292 105 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 CLEC18BQ6UXF7 455 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 CACNA1BQ00975 2339 aa10.1□□□□□ -0.79
TRIM27-205ENST00000481474 CAMTA1Q9Y6Y1 1673 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 EPPINO95925 133 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 IGFBP6P24592 240 aaPredicted RBP10.09□□□□□ -0.79
TRIM27-205ENST00000481474 AANATQ16613 207 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 PCSK4Q6UW60 755 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 COLCA1Q6ZS62 124 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 TTTY12Q9BZ98 90 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 LYRM2Q9NU23 88 aaPredicted RBP10.09□□□□□ -0.79
TRIM27-205ENST00000481474 ABCA9Q8IUA7 1624 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 KLF9Q13886 244 aaPredicted RBP10.09□□□□□ -0.79
TRIM27-205ENST00000481474 ATOH7Q8N100 152 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 OR2T10Q8NGZ9 312 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 PIPOXQ9P0Z9 390 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 NACAE9PAV3 2078 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 ABLIM2Q6H8Q1 611 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 SHISA5Q8N114 240 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 JKAMPQ9P055 326 aa10.09□□□□□ -0.79
TRIM27-205ENST00000481474 TSPOP30536 169 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms