RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 K7EPK0 472 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 DUS4LO95620 317 aaKnown RBP6.12□□□□□ -1.43
LSM5-210ENST00000480956 CECR9P0C854 216 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 PGAM2P15259 253 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 ERP29P30040 261 aaKnown RBP6.12□□□□□ -1.43
LSM5-210ENST00000480956 AKR1C3P42330 323 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 ADIGQ0VDE8 80 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 JOSD1Q15040 202 aaPredicted RBP6.12□□□□□ -1.43
LSM5-210ENST00000480956 PRR30Q53SZ7 412 aaPredicted RBP6.12□□□□□ -1.43
LSM5-210ENST00000480956 ZNF343Q6P1L6 599 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 ZFP1Q6P2D0 407 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 TOMM20LQ6UXN7 152 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 TMEM179BQ7Z7N9 219 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 LRRC18Q8N456 261 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 LINC01587Q99440 93 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 SLC25A2Q9BXI2 301 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 SPNS1Q9H2V7 528 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 DHRS4-AS1Q9P1J3 65 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 INSIG2Q9Y5U4 225 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 WNK3Q9BYP7 1800 aa6.12□□□□□ -1.43
LSM5-210ENST00000480956 FAM236DA0A1B0GTK5 79 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 FAM172BPA6NC97 362 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 A8MXK9 166 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 ZFAND5O76080 213 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 CHTF8P0CG12 524 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 FAM236CP0DP71 79 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 KLK2P20151 261 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 RPS24P62847 133 aaKnown RBP6.11□□□□□ -1.43
LSM5-210ENST00000480956 EGFEM1PQ0D2K5 195 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 GUCA2BQ16661 112 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 SMIM21Q3B7S5 101 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 FBXL19-AS1Q494R0 122 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 ZNF404Q494X3 552 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 AKR1C8PQ5T2L2 129 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 DNAJC24Q6P3W2 148 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 C2orf66Q6UXQ4 117 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 SLC25A45Q8N413 288 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 OR2M7Q8NG81 312 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 OR8J3Q8NGG0 315 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 OR2T4Q8NH00 348 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 OR5K1Q8NHB7 308 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 DCAKDQ8WVC6 231 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 NEURL3Q96EH8 262 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 ZNF285Q96NJ3 590 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 TMEM243Q9BU79 118 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 KRTAP4-9Q9BYQ8 210 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 RNASE7Q9H1E1 156 aaKnown RBP6.11□□□□□ -1.43
LSM5-210ENST00000480956 TMPRSS5Q9H3S3 457 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 C6orf106Q9H6K1 298 aaPredicted RBP6.11□□□□□ -1.43
LSM5-210ENST00000480956 RBM12B-AS1Q9P1G2 102 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 BTRCQ9Y297 605 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 TAF1LQ8IZX4 1826 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 SHANK3Q9BYB0 1731 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 PARP4Q9UKK3 1724 aaKnown RBP6.11□□□□□ -1.43
LSM5-210ENST00000480956 IGHV6-1A0A0B4J1U7 121 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 WI2-2373I1.2A0A1W2PRP0 233 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 MYBPHLA2RUH7 354 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 BET1O15155 118 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 CRYBA1P05813 215 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 HLA-DRB3P79483 266 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 FAM222AQ5U5X8 452 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 ZNF771Q7L3S4 317 aaPredicted RBP6.11□□□□□ -1.43
LSM5-210ENST00000480956 OR9A2Q8NGT5 310 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 OR5J2Q8NH18 312 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 ITLN1Q8WWA0 313 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 ZNF501Q96CX3 271 aaPredicted RBP6.11□□□□□ -1.43
LSM5-210ENST00000480956 FXYD5Q96DB9 178 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 PYURFQ96I23 114 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 OR4K3Q96R72 315 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 RSPO3Q9BXY4 272 aaPredicted RBP6.11□□□□□ -1.43
LSM5-210ENST00000480956 RASL12Q9NYN1 266 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 RNF7Q9UBF6 113 aa6.11□□□□□ -1.43
LSM5-210ENST00000480956 RSL24D1Q9UHA3 163 aaKnown RBP6.11□□□□□ -1.43
LSM5-210ENST00000480956 hADV38S2A0JD32 116 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 CCDC22O60826 627 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 KBTBD11O94819 623 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 GADD45AP24522 165 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 TCEAL5Q5H9L2 206 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 ARL9Q6T311 187 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 C20orf196Q8IYI0 205 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 LINC00337Q8N6G1 96 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 TCEAL3Q969E4 200 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 RPUSD4Q96CM3 377 aaKnown RBP6.1□□□□□ -1.43
LSM5-210ENST00000480956 SLC35E1Q96K37 410 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 PTGES2Q9H7Z7 377 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 TMEM216Q9P0N5 145 aa6.1□□□□□ -1.43
LSM5-210ENST00000480956 EP400Q96L91 3159 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 A0A1W2PRE2 83 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 UPK1AO00322 258 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 HMGB3O15347 200 aaKnown RBP6.09□□□□□ -1.43
LSM5-210ENST00000480956 FOLR2P14207 255 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 PHBP35232 272 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 CTBP2P56545 445 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 ATAD3CQ5T2N8 411 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 LCN8Q6JVE9 175 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 CLEC20AQ6ZU45 233 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 GOLT1AQ6ZVE7 132 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 DEFB125Q8N687 156 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 ZNRF2Q8NHG8 242 aa6.09□□□□□ -1.43
LSM5-210ENST00000480956 TMEM190Q8WZ59 177 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms