RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 ARF6P62330 175 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 TMEM249Q2WGJ8 235 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 SCGB2B2Q4G0G5 96 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 FAM53AQ6NSI3 398 aaPredicted RBP13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 BTNL3Q6UXE8 466 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 SLC25A48Q6ZT89 311 aaKnown RBP13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 MARVELD1Q9BSK0 173 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 TMPRSS13Q9BYE2 586 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 GHITMQ9H3K2 345 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 ONECUT1Q9UBC0 465 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 GPR132Q9UNW8 380 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 GAB2Q9UQC2 676 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 NUBP2Q9Y5Y2 271 aa13.77□□□□□ -0.21
SCAMP3-207ENST00000480219 IGHV3-43A0A0B4J1X8 118 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 IGKV1D-13A0A0B4J2D9 117 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 SLC22A5O76082 557 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 IGHV3-43DP0DP04 118 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 IGKV1-13P0DP09 117 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 LUMP51884 338 aaPredicted RBP13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 HERV-K104P61576 105 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 UTF1Q5T230 341 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 OR11H6Q8NGC7 330 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 OR10V1Q8NGI7 309 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 CREB3L1Q96BA8 519 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 MSI2Q96DH6 328 aaKnown RBP13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 ZNF486Q96H40 463 aaPredicted RBP13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 SCGB3A2Q96PL1 93 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 RSRP1Q9BUV0 290 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 PSG11Q9UQ72 335 aa13.76□□□□□ -0.21
SCAMP3-207ENST00000480219 ZNF469Q96JG9 3925 aaPredicted RBP13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 FAM172BPA6NC97 362 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 IGLV1-47P01700 117 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 SPNP16150 400 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 RAB7AP51149 207 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 ZNF134P52741 427 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 ZNF137PP52743 207 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 LTC4SQ16873 150 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 CT45A1Q5HYN5 189 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 HCP5Q6MZN7 132 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 LPCAT3Q6P1A2 487 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 CCBE1Q6UXH8 406 aaPredicted RBP13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 SLC38A6Q8IZM9 456 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 BEND2Q8NDZ0 799 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 OR2AK2Q8NG84 335 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 OR9G1Q8NH87 305 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 CT45A3Q8NHU0 189 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 MARCH1Q8TCQ1 289 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 TMEM186Q96B77 213 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 UPRTQ96BW1 309 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 TBX15Q96SF7 602 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 ABHD14AQ9BUJ0 271 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 ALX4Q9H161 411 aaPredicted RBP13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 C20orf85Q9H1P6 137 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 IFI27L2Q9H2X8 130 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 VSIG4Q9Y279 399 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.75□□□□□ -0.217e-9■□□□□ 10.7
SCAMP3-207ENST00000480219 ARHGAP32A7KAX9 2087 aa13.75□□□□□ -0.21
SCAMP3-207ENST00000480219 OTOGQ6ZRI0 2925 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 MED13LQ71F56 2210 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 IGHV2-26A0A0B4J1V2 119 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 J3QLI3 93 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 J3QR06 171 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 IGLV2-14P01704 120 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 CTSDP07339 412 aaPredicted RBP13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 NFYBP25208 207 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 GNRHRP30968 328 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 RND3P61587 244 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 METTL11BQ5VVY1 283 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 PLET1Q6UQ28 207 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 GLCCI1Q86VQ1 547 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 CENPSQ8N2Z9 138 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 ZFAND1Q8TCF1 268 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 AKR1E2Q96JD6 320 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 SUCNR1Q9BXA5 334 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 C5orf66Q9H5L9 145 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 HEXA-AS1Q9H8Q6 139 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 LPAR2Q9HBW0 351 aa13.74□□□□□ -0.21
SCAMP3-207ENST00000480219 ODF3BA8MYP8 253 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 SLC31A2O15432 143 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 OR8U9P0C7N5 309 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 UBE2MP61081 183 aaKnown RBP13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 EIF4EBP1Q13541 118 aaPredicted RBP13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 TRIM16LQ309B1 348 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 DCAF12L2Q5VW00 463 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 NCR3LG1Q68D85 454 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 ZNF626Q68DY1 528 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 VMO1Q7Z5L0 202 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 ODF3L1Q8IXM7 274 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 ABHD12Q8N2K0 398 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 ZNF645Q8N7E2 425 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 ZBTB34Q8NCN2 500 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 BVESQ8NE79 360 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 OR13D1Q8NGV5 346 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 OR8U1Q8NH10 309 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 RTBDNQ9BSG5 229 aaPredicted RBP13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 CLEC7AQ9BXN2 247 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 NUDT15Q9NV35 164 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 HIF1ANQ9NWT6 349 aa13.73□□□□□ -0.21
SCAMP3-207ENST00000480219 NOTCH2Q04721 2471 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms