RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 RBPMSQ93062 196 aaKnown RBP9.15□□□□□ -0.94
VTI1A-204ENST00000480057 OR10C1Q96KK4 312 aa9.15□□□□□ -0.94
VTI1A-204ENST00000480057 CCL13Q99616 98 aa9.15□□□□□ -0.94
VTI1A-204ENST00000480057 RAB1BQ9H0U4 201 aa9.15□□□□□ -0.94
VTI1A-204ENST00000480057 PLEKHF2Q9H8W4 249 aa9.15□□□□□ -0.94
VTI1A-204ENST00000480057 CALYQ9NYX4 217 aa9.15□□□□□ -0.94
VTI1A-204ENST00000480057 PRR13Q9NZ81 148 aa9.15□□□□□ -0.94
VTI1A-204ENST00000480057 CLN8Q9UBY8 286 aa9.15□□□□□ -0.94
VTI1A-204ENST00000480057 LINC00312Q9Y6C7 94 aa9.15□□□□□ -0.94
VTI1A-204ENST00000480057 RAB7AP51149 207 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 CATR1Q13166 79 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 EIF4EBP1Q13541 118 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-204ENST00000480057 SMCO1Q147U7 214 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 C17orf58Q2M2W7 97 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 Q3ZCU0 254 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 MORN2Q502X0 79 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 TMEM268Q5VZI3 342 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 C11orf71Q6IPW1 123 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 TMUB2Q71RG4 321 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 LYZL2Q7Z4W2 148 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 ZCCHC24Q8N2G6 241 aaKnown RBP9.14□□□□□ -0.95
VTI1A-204ENST00000480057 DRAM1Q8N682 238 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 FAM216BQ8N7L0 139 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 TPRX1Q8N7U7 411 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 SLC35G3Q8N808 338 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 INO80EQ8NBZ0 244 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-204ENST00000480057 DEFB108BQ8NET1 73 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 LHFPL5Q8TAF8 219 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 CCL17Q92583 94 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 CNTNAP3BQ96NU0 1288 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 HSD17B10Q99714 261 aaKnown RBP9.14□□□□□ -0.95
VTI1A-204ENST00000480057 RNF126Q9BV68 326 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 CNTNAP3Q9BZ76 1288 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 DCAF16Q9NXF7 216 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 SLC25A10Q9UBX3 287 aaPredicted RBP9.14□□□□□ -0.95
VTI1A-204ENST00000480057 KCNS2Q9ULS6 477 aa9.14□□□□□ -0.95
VTI1A-204ENST00000480057 MPTX1A8MV57 137 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 B8ZZF3 427 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 TMPRSS2O15393 492 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 NDUFB3O43676 98 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 RP2O75695 350 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 ATG12O94817 140 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 RLN2P04090 185 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 SERPINE2P07093 398 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 NUP62P37198 522 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-204ENST00000480057 LOXL3P58215 753 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 GNMTQ14749 295 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 LRRC37A5PQ49AS3 106 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 LRRC10Q5BKY1 277 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 NMSQ5H8A3 153 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 TEX261Q6UWH6 196 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 MEX3BQ6ZN04 569 aaKnown RBP9.13□□□□□ -0.95
VTI1A-204ENST00000480057 TGIF2LYQ8IUE0 185 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-204ENST00000480057 LSM10Q969L4 123 aaKnown RBP9.13□□□□□ -0.95
VTI1A-204ENST00000480057 AQP10Q96PS8 301 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 AGMATQ9BSE5 352 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 OR2D2Q9H210 308 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 GAL3ST2Q9H3Q3 398 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 GFOD1Q9NXC2 390 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 MBD2Q9UBB5 411 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 GNG12Q9UBI6 72 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 U3KQ87 197 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 DSCAMO60469 2012 aa9.13□□□□□ -0.95
VTI1A-204ENST00000480057 RAI1Q7Z5J4 1906 aaPredicted RBP9.13□□□□□ -0.95
VTI1A-204ENST00000480057 ANKHD1Q8IWZ3 2542 aaKnown RBP9.12□□□□□ -0.95
VTI1A-204ENST00000480057 CACNA1DQ01668 2161 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 ITPR1Q14643 2758 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 TRBV23-1A0A0A0MS06 115 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 RNF222A6NCQ9 220 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 GPR37O15354 613 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 ADAM20O43506 726 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 DEDDO75618 318 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 IFNA7P01567 189 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 DANCRP0C864 163 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 SELLP14151 372 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 MMP9P14780 707 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 SSTR2P30874 369 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 PPP1CCP36873 323 aaKnown RBP9.12□□□□□ -0.95
VTI1A-204ENST00000480057 RAB32Q13637 225 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 THOC7Q6I9Y2 204 aaKnown RBP9.12□□□□□ -0.95
VTI1A-204ENST00000480057 TCF23Q7RTU1 214 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 SLC51BQ86UW2 128 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 OR8H1Q8NGG4 311 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 OR4D5Q8NGN0 318 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 UBALD1Q8TB05 177 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 CD300LFQ8TDQ1 290 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 DCUN1D4Q92564 292 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 RAB39BQ96DA2 213 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 DCTN5Q9BTE1 182 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 ARL6Q9H0F7 186 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 PARP12Q9H0J9 701 aaKnown RBP9.12□□□□□ -0.95
VTI1A-204ENST00000480057 IDI2-AS1Q9NZ38 188 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 GSKIPQ9P0R6 139 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 LAMP3Q9UQV4 416 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 ZZEF1O43149 2961 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 ARFGEF3Q5TH69 2177 aa9.12□□□□□ -0.95
VTI1A-204ENST00000480057 A0A1B0GU03 582 aa9.11□□□□□ -0.95
VTI1A-204ENST00000480057 A0A1B0GW55 424 aa9.11□□□□□ -0.95
VTI1A-204ENST00000480057 KANTRA0A1W2PQU2 76 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms