RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 WASF3Q9UPY6 502 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 KIAA1549Q9HCM3 1950 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 A0A1W2PNU3 283 aaPredicted RBP11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 A0A1W2PR80 420 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 GJE1A6NN92 205 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 DVL1O14640 695 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 CYTIPO60759 359 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 DFFBO76075 338 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 IGKV1D-33P01593 117 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 IGKV1-33P01594 117 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 MMP7P09237 267 aaPredicted RBP11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 BPIFB3P59826 476 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 TRA2AQ13595 282 aaKnown RBP eCLIP11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 NEK7Q8TDX7 302 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 MBD3L1Q8WWY6 194 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 PLK3Q9H4B4 646 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 SRD5A3Q9H8P0 318 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 PLA2G3Q9NZ20 509 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 LOXL2Q9Y4K0 774 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 R4GN57 208 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 LAMA5O15230 3695 aa11.32□□□□□ -0.6
PDZRN3-208ENST00000479530 ZNF816-ZNF321PA0A0X1KG74 233 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 H0Y980 276 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 IGKV1-39P01597 117 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 IGKV1D-39P04432 117 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 F2RP25116 425 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 GFRA1P56159 465 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 C3AR1Q16581 482 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 ZNF525Q8N782 197 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 RPUSD4Q96CM3 377 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 GUCD1Q96NT3 240 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 SMIM7Q9BQ49 75 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 ESPL1Q14674 2120 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 TNRC6BQ9UPQ9 1833 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 MDH2P40926 338 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 CYB561P49447 251 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 GPM6AP51674 278 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 DCAF12Q5T6F0 453 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 ZNF66Q6ZN08 573 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 UBALD2Q8IYN6 164 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 SCGB1C1Q8TD33 95 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 RNASEH2CQ8TDP1 164 aaKnown RBP11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 PCGF1Q9BSM1 259 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 NDUFAF3Q9BU61 184 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 CACNG5Q9UF02 275 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 VAX2Q9UIW0 290 aa11.31□□□□□ -0.6
PDZRN3-208ENST00000479530 BOD1L1Q8NFC6 3051 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 FAM166BA8MTA8 275 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 OR4A8P0C604 315 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 GNB2P62879 340 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 ARF1P84077 181 aaKnown RBP11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 NCR3LG1Q68D85 454 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 GATAD1Q8WUU5 269 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 THOC3Q96J01 351 aaKnown RBP11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 ACTR3CQ9C0K3 210 aaPredicted RBP11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 MTCH1Q9NZJ7 389 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 TP53TG5Q9Y2B4 290 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 TMEM265A0A087WTH1 108 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 DUXBA0A1W2PPF3 345 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 MAP1LC3B2A6NCE7 125 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 ZNF737O75373 536 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 DUSP3P51452 185 aaPredicted RBP11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 RNPS1Q15287 305 aaKnown RBP11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 TUSC5Q8IXB3 177 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 OR51G1Q8NGK1 321 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 KCNE4Q8WWG9 221 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 TMEM37Q8WXS4 190 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 ZNF488Q96MN9 340 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 DDA1Q9BW61 102 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 MAP1LC3BQ9GZQ8 125 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 MED13Q9UHV7 2174 aa11.3□□□□□ -0.6
PDZRN3-208ENST00000479530 TRAV39A0A0B4J263 110 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 TGOLN2O43493 480 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 CER1O95813 267 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 NGFP01138 241 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 TESK1Q15569 626 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 C6orf15Q6UXA7 325 aaPredicted RBP11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 Q6ZS49 121 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 RPP25LQ8N5L8 163 aaKnown RBP11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 OR56B2PQ8NGI1 322 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 RAB24Q969Q5 203 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 FOXJ2Q9P0K8 574 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 PRSS50Q9UI38 385 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 TECTAO75443 2155 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 A0A1W2PPQ1 181 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 CNOT4O95628 575 aaKnown RBP11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 SERPINE2P07093 398 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 CEACAM6P40199 344 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 RPL23P62829 140 aaKnown RBP11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 PEAR1Q5VY43 1037 aaPredicted RBP11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 MRGPRGQ86SM5 289 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 C1orf210Q8IVY1 113 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 UBALD1Q8TB05 177 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 OR4C12Q96R67 309 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 CTDSP1Q9GZU7 261 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 PSENENQ9NZ42 101 aa11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 ERRFI1Q9UJM3 462 aaPredicted RBP11.29□□□□□ -0.6
PDZRN3-208ENST00000479530 ATP23Q9Y6H3 246 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms