RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 SULT1A1P50225 295 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 TIMM23BQ5SRD1 257 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 ZNF295-AS1Q8N0V1 137 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 IL1F10Q8WWZ1 152 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 SH3BGRL3Q9H299 93 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 APC2O95996 2303 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 WRBO00258 174 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 OR8U8P0C7N1 319 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 ATP6V0CP27449 155 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 CEACAM6P40199 344 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 DRAM1Q8N682 238 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 PBDC1Q9BVG4 233 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 TMEM231Q9H6L2 316 aa10.26□□□□□ -0.77
PTPRF-212ENST00000477970 IGKV1-5P01602 117 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 OR3A1P47881 315 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 CR1LQ2VPA4 569 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 FAM122CQ6P4D5 195 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 OR5C1Q8NGR4 320 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 OPN3Q9H1Y3 402 aaPredicted RBP10.25□□□□□ -0.77
PTPRF-212ENST00000477970 NCOR1P1Q9H4R4 102 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 MMP24Q9Y5R2 645 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 C12orf77C9JDV5 145 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 CRYABP02511 175 aaKnown RBP10.25□□□□□ -0.77
PTPRF-212ENST00000477970 P0C879 139 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 CD80P33681 288 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 DYNLT3P51808 116 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 GUK1Q16774 197 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 STX12Q86Y82 276 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 OR51H1Q8NH63 302 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 COQ2Q96H96 371 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 GPHA2Q96T91 129 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 URB1O60287 2271 aaKnown RBP10.25□□□□□ -0.77
PTPRF-212ENST00000477970 CTRB1P17538 263 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 HTD2P86397 168 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 C1orf185Q5T7R7 199 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 CTRB2Q6GPI1 263 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 HSD17B11Q8NBQ5 300 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 MAGT1Q9H0U3 335 aa10.25□□□□□ -0.77
PTPRF-212ENST00000477970 C9JQL5 133 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 C3orf80F5H4A9 247 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 IGHV3-13P01766 116 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 ARHGDIBP52566 201 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 HFEQ30201 348 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 OR2G3Q8NGZ4 309 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 SYNGR2O43760 224 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 NPBWR1P48145 328 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 SFXN3Q9BWM7 321 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 FAM215AQ9Y5M1 114 aa10.24□□□□□ -0.77
PTPRF-212ENST00000477970 SRRM5B3KS81 715 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 HBZP02008 142 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 FLI1Q01543 452 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-212ENST00000477970 CHD3Q12873 2000 aaKnown RBP10.23□□□□□ -0.77
PTPRF-212ENST00000477970 ACACAQ13085 2346 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 SMUG1Q53HV7 270 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 KRTCAP3Q53RY4 240 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 ZNF66Q6ZN08 573 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 TMEM182Q6ZP80 229 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-212ENST00000477970 Q6ZRM9 215 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 PPP1R3CQ9UQK1 317 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 ASPMQ8IZT6 3477 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 TRAV1-1A0A0B4J248 108 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 WNT9BO14905 357 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 PRH1P02810 166 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 ADH4P08319 380 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 SFTPCP11686 197 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 CEACAM8P31997 349 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-212ENST00000477970 NKX6-1P78426 367 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-212ENST00000477970 ZNF616Q08AN1 781 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 OR1L1Q8NH94 360 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 PSMG3Q9BT73 122 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-212ENST00000477970 CACNG5Q9UF02 275 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 OR14J1Q9UGF5 321 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 KCNS2Q9ULS6 477 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 LAMP3Q9UQV4 416 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 PPIHO43447 177 aaKnown RBP10.23□□□□□ -0.77
PTPRF-212ENST00000477970 CATR1Q13166 79 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 CLINT1Q14677 625 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 TBR1Q16650 682 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 PRAMEF6Q5VXH4 476 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 ZNF826PQ6ZT77 177 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 ZFHX4Q86UP3 3567 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 PKD1L2Q7Z442 2459 aa10.23□□□□□ -0.77
PTPRF-212ENST00000477970 DMXL2Q8TDJ6 3036 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 IGLV3-9A0A075B6K5 115 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 TRAV39A0A0B4J263 110 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 NUPL2O15504 423 aaKnown RBP10.22□□□□□ -0.77
PTPRF-212ENST00000477970 IL2RGP31785 369 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 GLRXP35754 106 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 CEBPDP49716 269 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-212ENST00000477970 COL10A1Q03692 680 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 PARP12Q9H0J9 701 aaKnown RBP10.22□□□□□ -0.77
PTPRF-212ENST00000477970 TUBA4BQ9H853 241 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 KIAA1456Q9P272 454 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 RNF150Q9ULK6 438 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 RBM7Q9Y580 266 aaKnown RBP10.22□□□□□ -0.77
PTPRF-212ENST00000477970 C15orf65H3BRN8 121 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 ZNF737O75373 536 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 KRBOX4Q5JUW0 171 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 SPSB3Q6PJ21 355 aa10.22□□□□□ -0.77
PTPRF-212ENST00000477970 RBMXL3Q8N7X1 1067 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms